RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Ccdc78D3Z5T1 437 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gm6121L7MUF1 212 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Nmt1O70310 496 aaKnown RBP12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 DtnbO70585 659 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Spata18Q0P557 537 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Znf367Q0VDT2 340 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 StilQ60988 1262 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Sp4Q62445 782 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Mcf2lQ64096 1149 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 SncbQ91ZZ3 133 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Snx10Q9CWT3 201 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Spc24Q9D083 201 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gys1Q9Z1E4 738 aaKnown RBP12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Cacna2d3Q9Z1L5 1091 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Trappc3O55013 180 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Csf1rP09581 977 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ncf1Q09014 390 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Agxt2Q3UEG6 513 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Brd2Q7JJ13 798 aaKnown RBP12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 AarsQ8BGQ7 968 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ttc16Q8C1F5 767 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gramd4Q8CB44 633 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 OtoaQ8K561 1137 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Slc12a6Q924N4 1150 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 MtrA6H5Y3 1253 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Mroh8E9PYI4 1049 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Usp17lbE9Q9U0 468 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Chmp6P0C0A3 200 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Psmd1Q3TXS7 953 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Fam198bQ3UPI1 517 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Klra5Q60652 266 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Epha7Q61772 998 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 CrkQ64010 304 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Zdhhc24Q6IR37 284 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Rps6ka6Q7TPS0 764 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ranbp17Q99NF8 1088 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 FechP22315 420 aaKnown RBP12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Rgl1Q60695 768 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Zic5Q7TQ40 622 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 3830417A13RikQ8BQJ2 303 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 CnstQ8CBC4 711 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ctage5Q8R311 779 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Bzw2Q91VK1 419 aaKnown RBP12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Zmynd10Q99ML0 440 aa12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ctnnbl1Q9CWL8 563 aaKnown RBP12.55□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Krt36B1AQ75 473 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gm2030D3Z7C4 212 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gimap9G3X987 291 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Sclt1G5E861 688 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Klc1O88447 541 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Pcdha4O88689 947 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Cep126Q0VBV7 1103 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 FdxrQ61578 494 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Myo6Q64331 1265 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Cnot10Q8BH15 744 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Synpo2Q91YE8 1087 aaKnown RBP12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Dqx1Q924H9 718 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gimap4Q99JY3 219 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Pstpip2Q99M15 334 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 PpihQ9D868 188 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Stk4Q9JI11 487 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Plch1Q4KWH5 1682 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Cpb1B2RS76 415 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ccdc85cE9Q6B2 420 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Exoc4O35382 975 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Traf5P70191 558 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Phactr4Q501J7 694 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Xlr3bQ6P205 226 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Cep104Q80V31 926 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ccdc50Q810U5 305 aaKnown RBP12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 SpidrQ8BGX7 933 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Armc6Q8BNU0 468 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 PdxkQ8K183 312 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Cbwd1Q8VEH6 393 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Tdrd3Q91W18 743 aaKnown RBP12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Bhmt2Q91WS4 363 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 4921524L21RikQ9D5T2 438 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Drap1Q9D6N5 205 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Cabp5Q9JLK3 173 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Edf1Q9JMG1 148 aaKnown RBP12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ltn1Q6A009 1767 aa12.54□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Clrn2B2RVW2 232 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Epha3P29319 983 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Vcam1P29533 739 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 MyrflQ3UN70 904 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ccdc92bQ5SUE3 299 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Six2Q62232 296 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Q6PD19 689 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Mis12Q9CY25 206 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Lman1Q9D0F3 517 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Znf654Q9DAU9 571 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Uchl3Q9JKB1 230 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 NagaQ9QWR8 415 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Slc26a4Q9R155 780 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 ArcQ9WV31 396 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Heg1E9Q7X6 1337 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Kiaa1522A2A7S8 1013 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Klhdc7aA2APT9 773 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gm14525B1AZA0 212 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gm2012B1B0R1 212 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms