RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Atp1a1Q8VDN2 1023 aaKnown RBP8.27□□□□□ -1.09
Trim40-201ENSMUST00000087158 YwhabQ9CQV8 246 aaKnown RBP8.27□□□□□ -1.09
Trim40-201ENSMUST00000087158 Gpr37Q9QY42 600 aa8.27□□□□□ -1.09
Trim40-201ENSMUST00000087158 Ercc4Q9QZD4 917 aa8.27□□□□□ -1.09
Trim40-201ENSMUST00000087158 Pappa2E9PZ87 1789 aa8.27□□□□□ -1.09
Trim40-201ENSMUST00000087158 Dicer1Q8R418 1916 aa8.27□□□□□ -1.09
Trim40-201ENSMUST00000087158 Usp34Q6ZQ93 3582 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Gm3409A0A0G2JE67 319 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Gm45194A0A140LJG2 572 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Kcng1A2BDX4 514 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Gm28042B7ZCM9 1014 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Exoc3l2D3YUP5 789 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Gcom1E9PZ54 550 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Kcnh2O35219 1162 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Exoc4O35382 975 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Per1O35973 1291 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Pgrmc1O55022 195 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Senp1P59110 640 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Mcl1P97287 331 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Zc3h18Q0P678 948 aaKnown RBP8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Agxt2Q3UEG6 513 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Frmd8Q3UFK8 466 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 MyzapQ3UIJ9 466 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Ccdc114Q3UX62 658 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 ItgadQ3V0T4 1168 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Abhd15Q5F2F2 459 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Ppp1r13bQ62415 1087 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Q66JV7 365 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Pabpc4Q6PHQ9 660 aaKnown RBP8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Usp17leQ7M764 540 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Nek5Q7TSC3 627 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Bclaf1Q8K019 919 aaKnown RBP8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Vmn1r199Q8R280 367 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Ero1bQ8R2E9 467 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Rrp1bQ91YK2 724 aaKnown RBP8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Prc1Q99K43 603 aaKnown RBP8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Card14Q99KF0 999 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Map2k5Q9WVS7 448 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Slfn14V9GXG1 899 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 PurbO35295 324 aaKnown RBP8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Slc16a2O70324 545 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 UgcgO88693 394 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Ifnar1P33896 590 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Stim2P83093 746 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Krt86P97861 486 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Ttll12Q3UDE2 639 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Znf697Q569E7 569 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Znf354cQ571J5 560 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Spdye4aQ5IBH6 268 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Tmem130Q6NXM3 419 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Nsun6Q7TS68 476 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Rusc1Q8BG26 893 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Hpcal4Q8BGZ1 191 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 EtnpplQ8BWU8 499 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 MtrrQ8C1A3 696 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Bcas3Q8CCN5 928 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Sulf1Q8K007 870 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Eif3cQ8R1B4 911 aaKnown RBP8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Klhl20Q8VCK5 604 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Slc14a1Q8VHL0 384 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Rhobtb2Q91V93 728 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Pcdhb20Q91XZ9 799 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Sh2b1Q91ZM2 756 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Ranbp17Q99NF8 1088 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 PdclQ9DBX2 301 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 IydQ9DCX8 285 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Ngly1Q9JI78 651 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Tmod4Q9JLH8 345 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 Ddx25Q9QY15 484 aa8.26□□□□□ -1.09
Trim40-201ENSMUST00000087158 PhipQ8VDD9 1821 aaKnown RBP8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Sbno2Q7TNB8 1349 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Cntnap2Q9CPW0 1332 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Serpinb8O08800 374 aaKnown RBP8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Tp53P02340 387 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Lamp1P11438 406 aaKnown RBP8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Eps15P42567 897 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Hps5P59438 1126 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Psmb7P70195 277 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Taf1bP97358 586 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Etv6P97360 485 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Tubb5P99024 444 aaKnown RBP8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Sox10Q04888 466 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Otud5Q3U2S4 566 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Znhit6Q3UFB2 460 aaKnown RBP8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Tmtc1Q3UV71 942 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Tsr1Q5SWD9 803 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Shc3Q61120 474 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 AlcamQ61490 583 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Kcnk18Q6VV64 394 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 RragaQ80X95 313 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Map3k11Q80XI6 850 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Gpr180Q8BPS4 441 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Pnma1Q8C1C8 353 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 SucoQ8C341 1250 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Mrgprx1Q8CIP3 322 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 OtoaQ8K561 1137 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Uap1Q91YN5 522 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Nxf1Q99JX7 618 aaKnown RBP8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Ubxn2aQ99KJ0 258 aa8.25□□□□□ -1.09
Trim40-201ENSMUST00000087158 Igf2bp3Q9CPN8 579 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms