RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Tph1P17532 447 aa11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 HarsQ61035 509 aa11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Armcx2Q6A058 784 aaKnown RBP11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Bank1Q80VH0 783 aa11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Morc2bQ8C5W4 1022 aa11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Alx1Q8C8B0 326 aa11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 MlphQ91V27 590 aa11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Crnkl1P63154 690 aaKnown RBP11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Axdnd1Q3UZ57 424 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Caprin1Q60865 707 aaKnown RBP11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 WdpcpQ8C456 722 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Slc8a2Q8K596 921 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 PccaQ91ZA3 724 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ranbp17Q99NF8 1088 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Rnf4Q9QZS2 194 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Myh4Q5SX39 1939 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Iqcj-Schip1A0A088MLT8 559 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Serpinb3aG3X9V8 387 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Schip1P0DPB4 484 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Q3TQQ9 903 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Akap4Q60662 849 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tbc1d30Q69ZT9 766 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Med21Q9CQ39 144 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tgm5Q9D7I9 724 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Itsn1Q9Z0R4 1714 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Krt10P02535 570 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Mapk6Q61532 720 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tigd4Q8BUZ3 513 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Zfp317Q8C0Q5 607 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Rhobtb1Q9DAK3 695 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 EcsitQ9QZH6 435 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gdf11Q9Z1W4 405 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Nova2D3YVV7 556 aaKnown RBP11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Rufy4Q3TYX8 563 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ptk6Q64434 451 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ints9Q8K114 658 aaKnown RBP11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Snx2Q9CWK8 519 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Dgcr8Q9EQM6 773 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Pdcd7Q9WTY1 482 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gm3248K7N721 186 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gjb6P70689 261 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tcf12Q61286 706 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Dhx40Q6PE54 779 aaKnown RBP11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Brd2Q7JJ13 798 aaKnown RBP11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Atp6v0d2Q80SY3 350 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Atp5dQ9D3D9 168 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Trappc3O55013 180 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Asprv1Q09PK2 339 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Rhot1Q8BG51 631 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Nckap5lQ6GQX2 1323 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ccdc88cQ6VGS5 2009 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Serpina16D3Z660 418 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gm10250G3X9L6 160 aaKnown RBP11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Sesn2P58043 480 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ulk3Q3U3Q1 472 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Kiaa1841Q68FF0 718 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 CcnyQ8BGU5 341 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Washc5Q8C2E7 1159 aaKnown RBP11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Rrp1bQ91YK2 724 aaKnown RBP11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 4930449I24RikQ9D5E3 319 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Atp5hQ9DCX2 161 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Mb21d2Q8C525 428 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Mrpl47Q8K2Y7 252 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Scrn2Q8VCA8 425 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Q91WD4 421 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ddah1Q9CWS0 285 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tnni1Q9WUZ5 187 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Npas2P97460 816 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tmem63cQ8CBX0 802 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Dnajc28Q8VCE1 385 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Pold3Q9EQ28 462 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Hyou1Q9JKR6 999 aaKnown RBP11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Slc26a4Q9R155 780 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Znf521Q6KAS7 1311 aa11.14□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Meis1Q60954 390 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Acap3Q6NXL5 833 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ilf2Q9CXY6 390 aaKnown RBP11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Serpinb6cW4VSP4 379 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Map3k15A2AQW0 1331 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Ubr1O70481 1757 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Pspc1Q8R326 523 aaKnown RBP11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 TrabdQ99JY4 376 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Myo1cQ9WTI7 1063 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Vmn1r199Q8R280 367 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Vwa5aQ99KC8 793 aaKnown RBP11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 NfkbiaQ9Z1E3 314 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Trerf1Q8BXJ2 1205 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gm1141B9EJU1 475 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 PtprcP06800 1291 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Tex11Q14AT2 947 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Lca5Q80ST9 704 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 AsphQ8BSY0 741 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Cse1lQ9ERK4 971 aaKnown RBP11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Kcnh2O35219 1162 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Kctd1Q5M956 257 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Fhod1Q6P9Q4 1197 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 AdalQ80SY6 360 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 PycardQ9EPB4 193 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 HpdP49429 393 aa11.13□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Strip1Q8C079 837 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 144 ms