RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Phf20Q8BLG0 1010 aaKnown RBP7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 SucoQ8C341 1250 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Reep2Q8VCD6 254 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Rhobtb2Q91V93 728 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Dqx1Q924H9 718 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Plagl2Q925T4 496 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Abcf2Q99LE6 628 aaKnown RBP7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Peg12Q9WVA7 283 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Krt13P08730 437 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Opa1P58281 960 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Tubb4bP68372 445 aaKnown RBP7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 LxnP70202 222 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Meis2P97367 477 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Zscan2Q07230 614 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Drc1Q3USS3 753 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Gbp4Q61107 620 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Ctnna3Q65CL1 895 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 TbckQ8BM85 762 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Pnma1Q8C1C8 353 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Parp10Q8CIE4 960 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Nup58Q8R332 587 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 AdigQ8R400 80 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Nr3c2Q8VII8 978 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Vps33aQ9D2N9 598 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Golga5Q9QYE6 729 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 SmapQ9R0P4 181 aaKnown RBP7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Col3a1P08121 1464 aa7.49□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Pnpla6Q3TRM4 1355 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Gm8994E9PV04 411 aaKnown RBP7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Ncf2O70145 525 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Lrrc1Q80VQ1 524 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Dusp4Q8BFV3 398 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Chtf18Q8BIW9 969 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Tmx4Q8C0L0 335 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 C130026I21RikQ8C898 291 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 PccaQ91ZA3 724 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 YwhabQ9CQV8 246 aaKnown RBP7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Tmem192Q9CXT7 266 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 PrameQ9D4Z5 464 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Znf609Q8BZ47 1413 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Gm4297D3YWB7 211 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Gm3095E9Q058 166 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Hoxa11P31311 313 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Wnt10bP48614 389 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Bend4P86174 541 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Brd9Q3UQU0 596 aaKnown RBP7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Mtus1Q5HZI1 1210 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Rasa3Q60790 834 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Tm4sf1Q64302 202 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Slc9c1Q6UJY2 1175 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Pgrmc2Q80UU9 217 aaKnown RBP7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Iqcb1Q8BP00 598 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Wrap53Q8VC51 532 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Ivns1abpQ920Q8 642 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Extl2Q9ES89 330 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 UtrnE9Q6R7 3430 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Pik3r1P26450 724 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Mcl1P97287 331 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Cyp11b1Q3TG86 501 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Trim43aQ3TL54 445 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Palb2Q3U0P1 1104 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Slc10a4Q3UEZ8 437 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Miga1Q4QQM5 600 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Foxo6Q70KY4 559 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 SugctQ7TNE1 436 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Celf4Q7TSY6 486 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Spata21Q8BHW6 681 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Nemp2Q8CB65 421 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Rassf4Q8CB96 322 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Lgi2Q8K4Z0 550 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Trim66Q924W6 1242 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Cox16Q9CR63 106 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Tpd52l2Q9CYZ2 220 aaKnown RBP7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 4931423N10RikQ9D4J9 382 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Dpp7Q9ET22 506 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Dnajc7Q9QYI3 494 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Bnip3lQ9Z2F7 218 aa7.48□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Sema3fO88632 785 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Il13ra2O88786 383 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 H2afxP27661 143 aaKnown RBP7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 NsfP46460 744 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Sesn2P58043 480 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Myo1fP70248 1099 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 NyxP83503 476 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 TchpQ3TVW5 497 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Zfp953Q3UPV7 304 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Ice2Q3UZ18 988 aaKnown RBP7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Cnot7Q60809 285 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Tas2r134Q7TQB0 298 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Ints8Q80V86 995 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Rassf2Q8BMS9 326 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Spata17Q9D552 379 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 March8Q9DBD2 286 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Pcsk1nQ9QXV0 258 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Speer4f2E9Q366 295 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Eftud2O08810 971 aaKnown RBP7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Rnaseh1O70338 285 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 L1camP11627 1260 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Uhmk1P97343 419 aa7.47□□□□□ -1.21
Col6a6-201ENSMUST00000060896 Sox13Q04891 613 aa7.47□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms