RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Kcnj11Q61743 390 aa10.52□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Elmo3Q8BYZ7 720 aa10.52□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Trim47Q8C0E3 641 aa10.52□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Shtn1Q8K2Q9 631 aa10.52□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Pcdhgb4Q91XX6 912 aa10.52□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Lrrc74aA0A1Y7VMD6 494 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gm4297D3YWB7 211 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Birc2Q62210 612 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Slc26a6Q8CIW6 758 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Rpap2Q8VC34 614 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Nmrk1Q91W63 195 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Dnajc19Q9CQV7 116 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cd2bp2Q9CWK3 342 aaKnown RBP10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 PigoQ9JJI6 1093 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cul1Q9WTX6 776 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Osbpl9A2A8Z1 736 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Slc35g2D3YVE8 412 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gm8298J3QPI0 401 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Stk10O55098 966 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Zmym1Q3TJB1 983 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Yipf3Q3UDR8 347 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ccdc33Q3ULW6 985 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tfcp2l1Q3UNW5 479 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tbc1d1Q60949 1255 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ppp2r2aQ6P1F6 447 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Prr18Q6PAN7 307 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cep104Q80V31 926 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cnot10Q8BH15 744 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 4921504E06RikQ8CET2 560 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cdk17Q8K0D0 523 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Dnajc28Q8VCE1 385 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Slc5a5Q99PN0 618 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Lrrc57Q9D1G5 239 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Nop56Q9D6Z1 580 aaKnown RBP10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tldc2A2ACG1 198 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Folh1O35409 752 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Hnrnph1O35737 449 aaKnown RBP10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Eno1P17182 434 aaKnown RBP10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Scnn1aQ61180 699 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 GapdhsQ64467 440 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Chtf18Q8BIW9 969 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Btbd7Q8CFE5 1130 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 IntS13Q8QZV7 732 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Eif3hQ91WK2 352 aaKnown RBP10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Fam111aQ9D2L9 613 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Znf654Q9DAU9 571 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Fthl17aQ9DAX0 182 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cyp2s1Q9DBX6 501 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 IdeQ9JHR7 1019 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 FibpQ9JI19 357 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cetn2Q9R1K9 172 aa10.52□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Chrna9G3X8Z7 479 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Kcnu1O54982 1121 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 CalrP14211 416 aaKnown RBP10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Adcy8P97490 1249 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Psmd1Q3TXS7 953 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Trim65Q8BFW4 522 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Vps36Q91XD6 386 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cog1Q9Z160 980 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Sema3fO88632 785 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ice2Q3UZ18 988 aaKnown RBP10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 StilQ60988 1262 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ttc22Q8C159 568 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Fam118bQ8C569 351 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cfap36Q8C6E0 343 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 WaslQ91YD9 501 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ppp1r3aQ99MR9 1089 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Q9DAQ4 598 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Hsd3b7Q9EQC1 369 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Myh15E9Q264 1925 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Mmrn1B2RPV6 1210 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Aknad1E9Q8N6 675 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ephb4P54761 987 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Trim80Q3V061 624 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Pip5kl1Q6U7H8 395 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ccdc169Q8BXX9 214 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Mrgprx1Q8CIP3 322 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Pop1Q8K205 1045 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tdrd3Q91W18 743 aaKnown RBP10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Trex1Q91XB0 314 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 PccaQ91ZA3 724 aa10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Zcchc8Q9CYA6 709 aaKnown RBP10.51□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cfap221A9Q751 836 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 4933406M09RikG3XA12 479 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 FosP01101 380 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Becn2P0DM65 447 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Hnrnph2P70333 449 aaKnown RBP10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Sorbs1Q62417 1290 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 P2ry10Q8BFU7 328 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cpa5Q8R4H4 436 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gucy1a3Q9ERL9 691 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 PlekQ9JHK5 350 aaKnown RBP10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Uchl3Q9JKB1 230 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ankrd31A0A140LI88 1765 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Olfr552E9Q545 317 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Stmn4P63042 189 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cyfip2Q5SQX6 1253 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Q6PD19 689 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tmc4Q7TQ65 694 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Iws1Q8C1D8 766 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms