RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cfap221A9Q751 836 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Fam167bP17257 162 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Nedd1P33215 660 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Slc12a2P55012 1205 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Map3k9Q3U1V8 1077 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Vps41Q5KU39 853 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Krt31Q61765 416 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 TbataQ7TSD4 393 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gprc5cQ8K3J9 440 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rmi1Q9D4G9 616 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Sgk1Q9WVC6 431 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Speer3W4VSP1 261 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 LtbrP50284 415 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rps6P62754 249 aaKnown RBP12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Upf3bQ3ULL6 472 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Mapk6Q61532 720 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Inpp5fQ8CDA1 1132 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Snap47Q8R570 413 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Diaph3Q9Z207 1171 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Slitrk3Q810B9 980 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Epha10Q8BYG9 1007 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ago2Q8CJG0 860 aaKnown RBP12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gmcl1Q920G9 524 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Dhx58Q99J87 678 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Dbndd2Q9CRD4 158 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Chmp2aQ9DB34 222 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ccnyl1D3YUJ3 367 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Vmn2r87E9PZX4 848 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Eftud2O08810 971 aaKnown RBP12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ccdc92bQ5SUE3 299 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gpr150Q8BL07 427 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 DnerQ8JZM4 737 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Spdl1Q923A2 608 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 MlxiplQ99MZ3 864 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Mrps5Q99N87 432 aaKnown RBP12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 PalmdQ9JHU2 551 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Dnajc12Q9R022 198 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 ArcQ9WV31 396 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Eps15P42567 897 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Mmp14P53690 582 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Eif3j1Q3UGC7 261 aaKnown RBP12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Hdac10Q6P3E7 666 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rassf9Q8K342 435 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Atad3Q925I1 591 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Hyou1Q9JKR6 999 aaKnown RBP12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 DmtnQ9WV69 405 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ahnak2E9PYB0 1738 aaKnown RBP12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Pramel3A2AHA7 463 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gm7903A2AWL1 463 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 AV320801A2AWL3 467 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gm15023L7MUB4 467 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 HunkO88866 714 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 GpiP06745 558 aaKnown RBP12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 PrkceP16054 737 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Sec31aQ3UPL0 1230 aaKnown RBP12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 FtoQ8BGW1 502 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Spats2Q8K1N4 545 aaKnown RBP12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Pls3Q99K51 630 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gm45261A0A1B0GSP6 197 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Sema4dO09126 861 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Mtco1P00397 514 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 PrkcbP68404 671 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gngt1Q61012 74 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 ThrspQ62264 150 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Papd5Q68ED3 633 aaKnown RBP12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Nudt16Q6P3D0 195 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 PodnQ7TQ62 611 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Atg4cQ811C2 458 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tbc1d19Q8VDV7 526 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Pomgnt1Q91X88 660 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 IqcdQ9D3V1 458 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Drap1Q9D6N5 205 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Kcnq2Q9Z351 759 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gm5134E9QAB5 671 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 PhbP67778 272 aaKnown RBP12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ppp4r1Q8K2V1 951 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Pdlim2Q8R1G6 349 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Hip1Q8VD75 1029 aaKnown RBP12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Trub2Q91WG3 331 aaKnown RBP12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Dr1Q91WV0 176 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rhobtb3Q9CTN4 611 aa12.78□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Stk10O55098 966 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Slc16a2O70324 545 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 LxnP70202 222 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rit2P70425 217 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Hspbp1Q99P31 357 aaKnown RBP12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Emc2Q9CRD2 297 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Mis12Q9CY25 206 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Borcs6Q9D6W8 360 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tgm5Q9D7I9 724 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Krt8P11679 490 aaKnown RBP12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rd3Q8BRE0 195 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gjd4Q8BSD4 364 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Znf687Q9D2D7 1237 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tekt1Q9DAJ2 418 aa12.77□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Vmn2r121A2BE32 847 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ccdc13D3YV10 709 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gm10134F6ZQC6 126 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Tpp1O89023 562 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Got1P05201 413 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms