RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Gfpt1P47856 697 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 PfkmP47857 780 aaKnown RBP12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 March9Q3TZ87 348 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Rsph3aQ3UFY4 516 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Fam198aQ3UY90 562 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Pnma5Q5DTT8 618 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Dll1Q61483 722 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Ntan1Q64311 310 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Hdac4Q6NZM9 1076 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Znf653Q6YND2 615 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Btnl9Q8BJE2 536 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Dnai1Q8C0M8 701 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Ppfibp1Q8C8U0 969 aaKnown RBP12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Tbc1d10cQ8C9V1 444 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Smc2Q8CG48 1191 aaKnown RBP12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Fbxo18Q8K2I9 1042 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Cabp7Q91ZM8 215 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Rsph3bQ9DA80 389 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Mgea5Q9EQQ9 916 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Arl6ip4Q9JM93 229 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Gon4lQ9DB00 2260 aa12.67□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Rp1l1Q8CGM2 1859 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Klhl34A2AI76 644 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Nr1i2O54915 431 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Got1P05201 413 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Il1rapl1P59823 695 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Wdr5P61965 334 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Ano7Q14AT5 859 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 MaeaQ4VC33 396 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Ift122Q6NWV3 1182 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Daam2Q80U19 1115 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Ppme1Q8BVQ5 386 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 4933409G03RikQ8C5U0 320 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Mettl24Q8CCB5 363 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Wdr11Q8K1X1 1223 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Wrap53Q8VC51 532 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Cwh43Q91YL7 699 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 GhdcQ99J23 532 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Clp1Q99LI9 425 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Kremen1Q99N43 473 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Trim11Q99PQ2 467 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Krt23Q99PS0 422 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Mageb3Q9D2H4 330 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Slc5a4aQ9ET37 656 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Plcb1Q9Z1B3 1216 aa12.66□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Slc6a16A0A1L1SR47 742 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Akap17bA2A3V1 959 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 PotegA5H0M4 473 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 MtrA6H5Y3 1253 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Gm4907B1AXB9 411 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Vmn2r55G3UWZ4 781 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Vmn2r53L7N473 806 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Rnaseh1O70338 285 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Serpina1aP07758 413 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Serpina1bP22599 413 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Aldh2P47738 519 aaKnown RBP12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Tmod1P49813 359 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 RabggtbP53612 339 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Sptlc2P97363 560 aaKnown RBP12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Serpina1cQ00896 412 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Serpina1dQ00897 413 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 P4ha1Q60715 534 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Trpc6Q61143 930 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Fhod1Q6P9Q4 1197 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Gprc5aQ8BHL4 356 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Srek1Q8BZX4 494 aaKnown RBP12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Ccdc113Q8C5T8 377 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Olfr395Q8VGR3 312 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Yeats4Q9CR11 227 aaKnown RBP12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Col4a3bpQ9EQG9 624 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Trim54Q9ERP3 366 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Sgpp1Q9JI99 430 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Kcnq4Q9JK97 696 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Eya4Q9Z191 616 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Arih2Q9Z1K6 492 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Tmem131O70472 1877 aa12.65□□□□□ -0.38
Ccdc28b-201ENSMUST00000030586 Baz2bA2AUY4 2123 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Gm11985A0A1B0GS61 206 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Cul4bA2A432 970 aaKnown RBP12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Il4rP16382 810 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Cd22P35329 862 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Oas1fQ14AZ4 364 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Tgfbrap1Q3UR70 860 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Mpzl3Q3V3F6 237 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 E2f8Q58FA4 860 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Nudt16Q6P3D0 195 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Cd300aQ6SJQ0 318 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 PodnQ7TQ62 611 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Amer1Q7TS75 1132 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Sh3tc2Q80VA5 1289 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Agbl3Q8CDP0 1006 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Sept8Q8CHH9 429 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Hps3Q91VB4 1002 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Stk38Q91VJ4 465 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Polr3fQ921X6 316 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Polr3eQ9CZT4 710 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Nap1l5Q9JJF0 156 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 PrelpQ9JK53 378 aa12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Acot9Q9R0X4 439 aaKnown RBP12.64□□□□□ -0.39
Ccdc28b-201ENSMUST00000030586 Slc26a4Q9R155 780 aa12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms