RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Wdr70Q3TWF6 657 aa19.81■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Krt15Q61414 452 aa19.81■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Senp5Q6NXL6 749 aa19.81■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Serpinb3dQ6UKZ0 387 aa19.81■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Atg4cQ811C2 458 aa19.81■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Pnma1Q8C1C8 353 aa19.81■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Dph6Q9CQ28 267 aa19.81■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Serpina9Q9D7D2 418 aa19.81■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Rilpl1Q9JJC6 406 aa19.81■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Hebp1Q9R257 190 aa19.81■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Cpb1B2RS76 415 aa19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 FlgP11088 336 aa19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Sycp1Q62209 993 aa19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Sh3gl1Q62419 368 aa19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Krt74Q6IFZ9 495 aa19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Nup58Q8R332 587 aa19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Rpn1Q91YQ5 608 aaKnown RBP19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Rnaseh2aQ9CWY8 301 aa19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Galnt15Q9D2N8 638 aa19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Spock2Q9ER58 423 aa19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Zranb2Q9R020 330 aaKnown RBP19.8■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Gm28919A0A087WP35 240 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Calb1P12658 261 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Ccnd2P30280 289 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Pth1rP41593 591 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Gad1P48318 593 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Hps5P59438 1126 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Fam83hQ148V8 1209 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Sec31aQ3UPL0 1230 aaKnown RBP19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Oog4Q4G0C7 502 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Ccdc157Q5SPX1 718 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Six2Q62232 296 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Ppp1r3aQ99MR9 1089 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Tlr5Q9JLF7 859 aa19.79■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Otud7bB2RUR8 840 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Cyp2c68K7N6C2 491 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Tagap1P0CAX8 505 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Adamts10P58459 1104 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Ly9Q01965 654 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Klra9Q2TJJ8 266 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 ItpripQ3TNL8 555 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 KhsrpQ3U0V1 748 aaKnown RBP19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Rnf207Q3V3A7 635 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Carmil2Q3V3V9 1296 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Mapk6Q61532 720 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Sorbs1Q62417 1290 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Fgfr1opQ66JX5 399 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Dync1li2Q6PDL0 492 aaKnown RBP19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Map3k11Q80XI6 850 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Ireb2Q811J3 963 aaKnown RBP19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Psmd5Q8BJY1 504 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Znf428Q8C1M2 176 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Sash3Q8K352 380 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Ears2Q9CXJ1 523 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Rpap3Q9D706 660 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Slc34a2Q9DBP0 697 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Mxra8Q9DBV4 442 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 PdclQ9DBX2 301 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Dhtkd1A2ATU0 921 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Odf2A3KGV1 830 aaKnown RBP19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Pus7B7ZNL8 666 aaKnown RBP19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Gm10110D3Z5M2 615 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 ItgadQ3V0T4 1168 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Znf532Q6NXK2 1036 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Krit1Q6S5J6 736 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Entpd3Q8BFW6 529 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Fam53cQ8BXQ8 393 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Klhl36Q8R124 613 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Sucla2Q9Z2I9 463 aa19.78■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Gimap9G3X987 291 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Actn3O88990 900 aaKnown RBP19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Kcna2P63141 499 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Cyp11b1Q3TG86 501 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Sin3bQ62141 1098 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Mcf2lQ64096 1149 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Usp17leQ7M764 540 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Slc7a6osQ7TPE5 306 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Actn1Q7TPR4 892 aaKnown RBP19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Olfml3Q8BK62 406 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Hook3Q8BUK6 718 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Ppme1Q8BVQ5 386 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Fam13bQ8K2H3 851 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Ctage5Q8R311 779 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Lrrc57Q9D1G5 239 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Rnf6Q9DBU5 667 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Sh2b2Q9JID9 621 aa19.77■□□□□ 0.76
Chmp6-201ENSMUST00000026434 Klhdc7aA2APT9 773 aa19.76■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Lamp1P11438 406 aaKnown RBP19.76■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Bcat1P24288 386 aa19.76■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Taf1bP97358 586 aa19.76■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Trim43aQ3TL54 445 aa19.76■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Cd37Q61470 281 aa19.76■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Fam214aQ69ZK7 1075 aa19.76■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Pknox2Q8BG99 474 aa19.76■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Prl2b1Q9DAZ2 228 aa19.76■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Adgrf5G5E8Q8 1348 aa19.75■□□□□ 0.75
Chmp6-201ENSMUST00000026434 UgcgO88693 394 aa19.75■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Kif2aP28740 705 aa19.75■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Actn4P57780 912 aaKnown RBP19.75■□□□□ 0.75
Chmp6-201ENSMUST00000026434 Tarbp2P97473 365 aa19.75■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms