RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ugp2Q91ZJ5 508 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 CinpQ9D0V8 212 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ptk2bQ9QVP9 1009 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Slc25a13Q9QXX4 676 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 GakQ99KY4 1305 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pald1P70261 859 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Kcnb1Q03717 857 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 ScinQ60604 715 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Orc2Q60862 576 aaKnown RBP9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Mapk6Q61532 720 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Skiv2lQ6NZR5 1244 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Usp17leQ7M764 540 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Stkld1Q80YS9 662 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Q8BWG4 1187 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Klhl11Q8CE33 709 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Dthd1E9PZX1 795 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Raph1F2Z3U3 1266 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm1758F6VZZ1 202 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 NficP70255 439 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Runx2Q08775 607 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Hddc2Q3SXD3 199 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Akap4Q60662 849 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Kbtbd3Q8BHI4 607 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Slc25a24Q8BMD8 475 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Mei4Q8BRM6 389 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Scrn2Q8VCA8 425 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pdxdc1Q99K01 787 aaKnown RBP9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Sf3a3Q9D554 501 aaKnown RBP9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Q9D937 123 aaKnown RBP9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Carmil3Q3UFQ8 1375 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm28360A0A087WR25 190 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Hpcal4Q8BGZ1 191 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fndc3aQ8BX90 1198 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Syf2Q9D198 242 aaKnown RBP9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fmn2Q9JL04 1578 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Suclg2Q9Z2I8 433 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Trappc11B2RXC1 1133 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Sec24cG3X972 1096 aaKnown RBP9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ankrd42Q3V096 527 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Glra4Q61603 456 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Atl2Q6PA06 583 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Supt20hQ7TT00 530 aaKnown RBP9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ankrd23Q812A3 306 aa9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tor1aip1Q921T2 595 aaKnown RBP9.76□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Map7d3A2AEY4 876 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ifi207E9Q3L4 978 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Axdnd1Q3UZ57 424 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Q4VA45 678 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Flot2Q60634 428 aaKnown RBP9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Runx1t1Q61909 577 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Lrrc8dQ8BGR2 859 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fbxo44Q8BK26 255 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Scfd1Q8BRF7 639 aaKnown RBP9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rbm42Q91V81 474 aaKnown RBP9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Trim66Q924W6 1242 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Dhx58Q99J87 678 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Anxa13Q99JG3 317 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 PalmdQ9JHU2 551 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Angptl2Q9R045 493 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gcc2Q8CHG3 1679 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm28042B7ZCM9 1014 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Exoc7O35250 697 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Trappc3O55013 180 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rufy4Q3TYX8 563 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 ChukQ60680 745 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tgfb1i1Q62219 461 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Heatr3Q8BQM4 679 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 ParvaQ9EPC1 372 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Abcc1O35379 1528 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 A0A1Y7VML8 143 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Mageb2A2AHM0 380 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pfkfb3A7UAK5 555 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Abcb5B5X0E4 1255 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Vmn2r71L7N2D8 855 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Armc12Q80X86 340 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pspc1Q8R326 523 aaKnown RBP9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rpn1Q91YQ5 608 aaKnown RBP9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 ErmapQ9JLN5 566 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Arhgef26D3YYY8 869 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ttc17E9PVB5 1198 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm17615E9Q9P2 165 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm8897L7N294 181 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 D1Pas1P16381 660 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Eps8Q08509 821 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pbxip1Q3TVI8 727 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Bfsp2Q6NVD9 416 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pum3Q8BKS9 647 aaKnown RBP9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 TbckQ8BM85 762 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ppme1Q8BVQ5 386 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Zfp317Q8C0Q5 607 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pcdhb21Q91V48 774 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fip1l1Q9D824 581 aaKnown RBP9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rassf7Q9DD19 359 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rnf4Q9QZS2 194 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Atp6v0a1Q9Z1G4 839 aaKnown RBP9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ptch1Q61115 1434 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Adgrl1Q80TR1 1466 aa9.75□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Stat3P42227 770 aaKnown RBP9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Usp10P52479 792 aaKnown RBP9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Sh3tc2Q80VA5 1289 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms