RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Pdlim2Q8R1G6 349 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Fthl17aQ9DAX0 182 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Wdr19Q3UGF1 1341 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 CoblQ5NBX1 1337 aaKnown RBP15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Plcg1Q62077 1302 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Sec31aQ3UPL0 1230 aaKnown RBP15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Zc4h2Q68FG0 224 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Spats2lQ91WJ7 558 aaKnown RBP15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Rnf112Q96DY5 654 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Abcg3Q99P81 650 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Lrriq4A6H6A4 596 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Krt80Q0VBK2 452 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Akap4Q60662 849 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Map3k7Q62073 579 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 NfrkbQ6PIJ4 1296 aaKnown RBP15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Lsm14bQ8CGC4 385 aaKnown RBP15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Nrbf2Q8VCQ3 287 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Hip1Q8VD75 1029 aaKnown RBP15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Cnot8Q9D8X5 292 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Kif9Q9WV04 790 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Ccdc24E9PUW8 296 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Tlr3Q99MB1 905 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Polr3eQ9CZT4 710 aa15.04■□□□□ -0
Col1a1-201ENSMUST00000001547 Nfx1B1AY10 1114 aaKnown RBP15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Hspa1lP16627 641 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Atp8b1Q148W0 1251 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Psd3Q2PFD7 1037 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Slc2a13Q3UHK1 637 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 E2f8Q58FA4 860 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 C2cd5Q7TPS5 1016 aaKnown RBP15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Ccdc50Q810U5 305 aaKnown RBP15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Rassf9Q8K342 435 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Rtn3Q9ES97 964 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 MetP16056 1379 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 StamP70297 548 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Runx2Q08775 607 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Usp8Q80U87 1080 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Ppp1r12bQ8BG95 976 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Fam49aQ8BHZ0 323 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 EpgnQ924X1 152 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Rhobtb1Q9DAK3 695 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Casp8O89110 480 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 PccaQ91ZA3 724 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Sf3b3Q921M3 1217 aaKnown RBP15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Grin2dQ03391 1323 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Myo1eE9Q634 1107 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Hcls1P49710 486 aaKnown RBP15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 UrgcpQ5NCI0 926 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Ccdc154Q6RUT8 657 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Iqsec2Q5DU25 1478 aa15.03■□□□□ -0
Col1a1-201ENSMUST00000001547 Nme9A0A1L1SUL6 329 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Lrig2Q52KR2 1054 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Samhd1Q60710 627 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Slc9c1Q6UJY2 1175 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Dpp9Q8BVG4 862 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 JrklB2RRL2 523 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Tpp1O89023 562 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Caprin1Q60865 707 aaKnown RBP15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Ckap2lQ7TS74 745 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 NptxrQ99J85 493 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 GrapQ9CX99 217 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Sema3fO88632 785 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Ptk2P34152 1090 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Fam81aQ3UXZ6 364 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Akap7Q7TN79 314 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Rrp1bQ91YK2 724 aaKnown RBP15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Slc12a6Q924N4 1150 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Aldh1b1Q9CZS1 519 aa15.02■□□□□ -0
Col1a1-201ENSMUST00000001547 Syngap1F6SEU4 1340 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Mroh1E0CZ22 1640 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Ugt1a6bK9J7B2 531 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Gm21962L7N280 338 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Kpna2P52293 529 aaKnown RBP15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 MlxipQ2VPU4 917 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Ugt1a6Q64435 531 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Ugt1a7cQ6ZQM8 531 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Ndufv1Q91YT0 464 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Myo1hQ9D6A1 958 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Hspa8P63017 646 aaKnown RBP15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Ulk3Q3U3Q1 472 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Slc7a14Q8BXR1 771 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Ttc8Q8VD72 515 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Prpsap1Q9D0M1 356 aa15.02□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Cyth3O08967 399 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Pla2g4bP0C871 782 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Gjb6P70689 261 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Kcnb1Q03717 857 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Sdf4Q61112 361 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 PapolaQ61183 739 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 L3mbtl3Q8BLB7 883 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 EmsyQ8BMB0 1264 aaKnown RBP15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Ddah1Q9CWS0 285 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Map3k15A2AQW0 1331 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 L1camP11627 1260 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Olfr832Q7TRG9 312 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Lig4Q8BTF7 911 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Tbc1d19Q8VDV7 526 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Calr3Q9D9Q6 380 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Mgea5Q9EQQ9 916 aa15.01□□□□□ -0.01
Col1a1-201ENSMUST00000001547 Zcchc17Q9ESX4 241 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms