RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 LrmdaQ9D9B4 229 aa10.23□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Usp14Q9JMA1 493 aaKnown RBP10.23□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Atp2c2A7L9Z8 944 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Cfap70D3YVL2 1141 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Olfr552E9Q545 317 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Kcnma1Q08460 1209 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Trim80Q3V061 624 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Rasa3Q60790 834 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Sorbs1Q62417 1290 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 PodnQ7TQ62 611 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Trim65Q8BFW4 522 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 AopepQ8BXQ6 817 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Btbd7Q8CFE5 1130 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Rfc4Q99J62 364 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Tnpo2Q99LG2 887 aaKnown RBP10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Casz1Q9CWL2 1761 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Trove2O08848 538 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 ProcP33587 460 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Rasa2P58069 847 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Scnn1aQ61180 699 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 HrQ61645 1182 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Pim2Q62070 370 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Swap70Q6A028 585 aaKnown RBP10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Prr18Q6PAN7 307 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 P2ry10Q8BFU7 328 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Scfd1Q8BRF7 639 aaKnown RBP10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Trim47Q8C0E3 641 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Myef2Q8C854 591 aaKnown RBP10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Plcg2Q8CIH5 1265 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Thoc1Q8R3N6 657 aaKnown RBP10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Bcl2l12Q9D3J3 255 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 JmyQ9QXM1 983 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Tjp2Q9Z0U1 1167 aaKnown RBP10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Gm11549A0A286YD83 63 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Mms22lB1AUR6 1238 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Cd44P15379 778 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Eno1P17182 434 aaKnown RBP10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Tph1P17532 447 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 NppbP40753 121 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Cetn1P41209 172 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Ccdc125Q5U465 500 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Tbc1d1Q60949 1255 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Ppp2r5eQ61151 467 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Cyp26b1Q811W2 512 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Trmt2aQ8BNV1 574 aaKnown RBP10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 SucoQ8C341 1250 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Mrgprx1Q8CIP3 322 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 PdxkQ8K183 312 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Rabl3Q9D4V7 236 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Pdzd4Q9QY39 772 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Ttll10A4Q9F3 704 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Axin2O88566 840 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Zmym1Q3TJB1 983 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 RilpQ5ND29 369 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Gcfc2Q8BKT3 769 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Tdrd3Q91W18 743 aaKnown RBP10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Pcdhgb4Q91XX6 912 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 NkapQ9D0F4 415 aaKnown RBP10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Cmtm5Q9D6G9 156 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Hebp1Q9R257 190 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Gm11983V9GXS8 105 aa10.22□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Il27raO70394 623 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Krt35Q497I4 455 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Phf8Q80TJ7 1023 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Chtf18Q8BIW9 969 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Ints9Q8K114 658 aaKnown RBP10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Cpa5Q8R4H4 436 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Trex1Q91XB0 314 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Med10Q9CXU0 135 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 PpihQ9D868 188 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 CsadQ9DBE0 493 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Cyp2s1Q9DBX6 501 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Uchl3Q9JKB1 230 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Hs6st3Q9QYK4 470 aa10.21□□□□□ -0.77
Col6a1-201ENSMUST00000001147 Kcnk16G5E845 292 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Sstr3P30935 428 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Myo1fP70248 1099 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Pstpip1P97814 415 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Znf76Q8BMU0 568 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Iws1Q8C1D8 766 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ppp1r11Q8K1L5 131 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Onecut3Q8K557 490 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Acot11Q8VHQ9 594 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Eif3hQ91WK2 352 aaKnown RBP10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Dnajc19Q9CQV7 116 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ccdc182Q9D9C6 152 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 PigoQ9JJI6 1093 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Cep85lA0A1W2P884 806 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Serpina1bP22599 413 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Yipf3Q3UDR8 347 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Slc10a4Q3UEZ8 437 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Pla2g4eQ50L42 875 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Kcnj11Q61743 390 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Cacna2d2Q6PHS9 1154 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Gpr101Q80T62 511 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 PccaQ91ZA3 724 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Tekt2Q922G7 430 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 1700109H08RikQ9D9C0 210 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Cst12Q9DAN8 128 aa10.21□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Gsta4P24472 222 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms