RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W CFD1P40558 293 aa4.26□□□□□ -1.73
CBF5YLR175W CSL4P53859 292 aaPredicted RBP4.26□□□□□ -1.73
CBF5YLR175W HOT1Q03213 719 aa4.26□□□□□ -1.73
CBF5YLR175W RSF1Q05043 376 aa4.26□□□□□ -1.73
CBF5YLR175W FDH1Q08911 376 aa4.26□□□□□ -1.73
CBF5YLR175W RSA1Q08932 381 aa4.26□□□□□ -1.73
CBF5YLR175W VIK1Q12045 647 aa4.26□□□□□ -1.73
CBF5YLR175W BRR2P32639 2163 aaKnown RBP4.26□□□□□ -1.73
CBF5YLR175W SUI3P09064 285 aaKnown RBP4.25□□□□□ -1.73
CBF5YLR175W AAC3P18238 307 aa4.25□□□□□ -1.73
CBF5YLR175W GRR1P24814 1151 aa4.25□□□□□ -1.73
CBF5YLR175W YCR006CP25350 157 aa4.25□□□□□ -1.73
CBF5YLR175W YJU2P28320 278 aaPredicted RBP4.25□□□□□ -1.73
CBF5YLR175W YIM1P28625 365 aa4.25□□□□□ -1.73
CBF5YLR175W MSN2P33748 704 aa4.25□□□□□ -1.73
CBF5YLR175W TEF4P36008 412 aaKnown RBP4.25□□□□□ -1.73
CBF5YLR175W RCY1P39531 840 aa4.25□□□□□ -1.73
CBF5YLR175W SIT1P39980 628 aa4.25□□□□□ -1.73
CBF5YLR175W LAS21P40367 830 aa4.25□□□□□ -1.73
CBF5YLR175W GVP36P40531 326 aaKnown RBP4.25□□□□□ -1.73
CBF5YLR175W STE24P47154 453 aa4.25□□□□□ -1.73
CBF5YLR175W AAD10P47182 288 aa4.25□□□□□ -1.73
CBF5YLR175W RPS12P48589 143 aaKnown RBP4.25□□□□□ -1.73
CBF5YLR175W ARI1P53111 347 aaKnown RBP4.25□□□□□ -1.73
CBF5YLR175W YGR079WP53249 370 aa4.25□□□□□ -1.73
CBF5YLR175W RIM13Q03792 727 aa4.25□□□□□ -1.73
CBF5YLR175W SIZ1Q04195 904 aa4.25□□□□□ -1.73
CBF5YLR175W YMR226CQ05016 267 aaKnown RBP4.25□□□□□ -1.73
CBF5YLR175W ARO10Q06408 635 aa4.25□□□□□ -1.73
CBF5YLR175W PUS7Q08647 676 aaKnown RBP4.25□□□□□ -1.73
CBF5YLR175W YOR019WQ99248 730 aa4.25□□□□□ -1.73
CBF5YLR175W RIB3Q99258 208 aa4.25□□□□□ -1.73
CBF5YLR175W MF(ALPHA)1P01149 165 aa4.24□□□□□ -1.73
CBF5YLR175W ADE8P04161 214 aa4.24□□□□□ -1.73
CBF5YLR175W CBS1P14066 229 aa4.24□□□□□ -1.73
CBF5YLR175W THR1P17423 357 aaKnown RBP4.24□□□□□ -1.73
CBF5YLR175W FAR1P21268 830 aa4.24□□□□□ -1.73
CBF5YLR175W MSB1P21339 1137 aaKnown RBP4.24□□□□□ -1.73
CBF5YLR175W APN1P22936 367 aa4.24□□□□□ -1.73
CBF5YLR175W CTR86P25355 563 aa4.24□□□□□ -1.73
CBF5YLR175W LHP1P33399 275 aaKnown RBP4.24□□□□□ -1.73
CBF5YLR175W RPS27AP35997 82 aaKnown RBP4.24□□□□□ -1.73
CBF5YLR175W ZTA1P38230 334 aaKnown RBP4.24□□□□□ -1.73
CBF5YLR175W SIC1P38634 284 aa4.24□□□□□ -1.73
CBF5YLR175W RPS27BP38711 82 aa4.24□□□□□ -1.73
CBF5YLR175W TRR2P38816 342 aa4.24□□□□□ -1.73
CBF5YLR175W UME6P39001 836 aa4.24□□□□□ -1.73
CBF5YLR175W YIL152WP40455 235 aa4.24□□□□□ -1.73
CBF5YLR175W FAR7P43592 221 aa4.24□□□□□ -1.73
CBF5YLR175W ALK1P43633 760 aaKnown RBP4.24□□□□□ -1.73
CBF5YLR175W BIT61P47041 543 aa4.24□□□□□ -1.73
CBF5YLR175W HSV2P50079 448 aaPredicted RBP4.24□□□□□ -1.73
CBF5YLR175W HOS2P53096 452 aaPredicted RBP4.24□□□□□ -1.73
CBF5YLR175W CDH1P53197 566 aa4.24□□□□□ -1.73
CBF5YLR175W YGR266WP53326 701 aa4.24□□□□□ -1.73
CBF5YLR175W SRP1Q02821 542 aaKnown RBP4.24□□□□□ -1.73
CBF5YLR175W YPL107WQ02873 248 aa4.24□□□□□ -1.73
CBF5YLR175W RSC9Q03124 581 aa4.24□□□□□ -1.73
CBF5YLR175W TPP1Q03796 238 aa4.24□□□□□ -1.73
CBF5YLR175W RAD30Q04049 632 aa4.24□□□□□ -1.73
CBF5YLR175W SMA2Q04658 369 aa4.24□□□□□ -1.73
CBF5YLR175W YPR172WQ06608 200 aa4.24□□□□□ -1.73
CBF5YLR175W YPR091CQ06833 770 aa4.24□□□□□ -1.73
CBF5YLR175W LOT6Q07923 191 aa4.24□□□□□ -1.73
CBF5YLR175W MRX4Q12467 430 aa4.24□□□□□ -1.73
CBF5YLR175W SEC39Q12745 709 aa4.24□□□□□ -1.73
CBF5YLR175W TIM9O74700 87 aa4.24□□□□□ -1.73
CBF5YLR175W HOM3P10869 527 aa4.24□□□□□ -1.73
CBF5YLR175W KSS1P14681 368 aa4.24□□□□□ -1.73
CBF5YLR175W RRP7P25368 297 aaPredicted RBP4.24□□□□□ -1.73
CBF5YLR175W YOR062CP36025 268 aa4.24□□□□□ -1.73
CBF5YLR175W TUL1P36096 758 aa4.24□□□□□ -1.73
CBF5YLR175W YBR285WP38354 144 aa4.24□□□□□ -1.73
CBF5YLR175W BIG1P38813 335 aa4.24□□□□□ -1.73
CBF5YLR175W ICE2P40499 491 aa4.24□□□□□ -1.73
CBF5YLR175W SNM1P40993 198 aa4.24□□□□□ -1.73
CBF5YLR175W SPG5P42933 373 aa4.24□□□□□ -1.73
CBF5YLR175W DUG1P43616 481 aaKnown RBP4.24□□□□□ -1.73
CBF5YLR175W BNA3P47039 444 aaKnown RBP4.24□□□□□ -1.73
CBF5YLR175W ASK10P48361 1146 aa4.24□□□□□ -1.73
CBF5YLR175W SNP1Q00916 300 aaPredicted RBP4.24□□□□□ -1.73
CBF5YLR175W ENT2Q05785 613 aa4.24□□□□□ -1.73
CBF5YLR175W THI72Q08579 599 aa4.24□□□□□ -1.73
CBF5YLR175W YOR365CQ08844 703 aa4.24□□□□□ -1.73
CBF5YLR175W GUP2Q08929 609 aa4.24□□□□□ -1.73
CBF5YLR175W SKS1Q12505 502 aa4.24□□□□□ -1.73
CBF5YLR175W FAS1P07149 2051 aaKnown RBP4.23□□□□□ -1.73
CBF5YLR175W TEL1P38110 2787 aa4.23□□□□□ -1.73
CBF5YLR175W RHO1P06780 209 aaKnown RBP4.23□□□□□ -1.73
CBF5YLR175W DAL82P21705 255 aa4.23□□□□□ -1.73
CBF5YLR175W PBN1P25580 416 aa4.23□□□□□ -1.73
CBF5YLR175W UBC8P28263 218 aa4.23□□□□□ -1.73
CBF5YLR175W IDH1P28834 360 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
CBF5YLR175W ASF2P32448 525 aaPredicted RBP4.23□□□□□ -1.73
CBF5YLR175W DCG1P32460 244 aa4.23□□□□□ -1.73
CBF5YLR175W PTR2P32901 601 aa4.23□□□□□ -1.73
CBF5YLR175W NUF2P33895 451 aa4.23□□□□□ -1.73
CBF5YLR175W LST4P34239 828 aa4.23□□□□□ -1.73
CBF5YLR175W ECM8P38246 354 aa4.23□□□□□ -1.73
CBF5YLR175W SPO73P40031 143 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms