RNA–Protein interactions for RNA: YDR313C

PIB1, Transcript of RING-type ubiquitin ligase of the endosomal and vacuolar membranes, yeast

Gene PIB1, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIB1	YDR313C	RPL21A	Q02753	160 aa	Known RBP	3.13	□□□□□ -1.91
PIB1	YDR313C	URC2	Q04411	772 aa		3.13	□□□□□ -1.91
PIB1	YDR313C	NDL1	Q06568	189 aa		3.13	□□□□□ -1.91
PIB1	YDR313C	SFM1	Q12314	213 aa		3.13	□□□□□ -1.91
PIB1	YDR313C	RPL21B	Q12672	160 aa	Known RBP	3.13	□□□□□ -1.91
PIB1	YDR313C	RPS18A	P0CX55	146 aa	Known RBP	3.12	□□□□□ -1.91
PIB1	YDR313C	RPS18B	P0CX56	146 aa	Predicted RBP	3.12	□□□□□ -1.91
PIB1	YDR313C	PHO91	P27514	894 aa		3.12	□□□□□ -1.91
PIB1	YDR313C	TOA2	P32774	122 aa		3.12	□□□□□ -1.91
PIB1	YDR313C	QDR3	P38227	689 aa		3.12	□□□□□ -1.91
PIB1	YDR313C	KEG1	P43614	200 aa		3.12	□□□□□ -1.91
PIB1	YDR313C	ENT5	Q03769	411 aa	Known RBP	3.12	□□□□□ -1.91
PIB1	YDR313C	MSC3	Q05812	728 aa		3.12	□□□□□ -1.91
PIB1	YDR313C	DCI1	Q08558	271 aa		3.12	□□□□□ -1.91
PIB1	YDR313C	LDB17	Q12342	491 aa		3.12	□□□□□ -1.91
PIB1	YDR313C	HIF1	Q12373	385 aa		3.12	□□□□□ -1.91
PIB1	YDR313C	PRM7	Q12459	698 aa		3.12	□□□□□ -1.91
PIB1	YDR313C	BI3	Q9ZZW7	517 aa		3.12	□□□□□ -1.91
PIB1	YDR313C	CMK2	P22517	447 aa		3.11	□□□□□ -1.91
PIB1	YDR313C	FMT1	P32785	401 aa		3.11	□□□□□ -1.91
PIB1	YDR313C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
PIB1	YDR313C	TOS2	P50078	622 aa		3.11	□□□□□ -1.91
PIB1	YDR313C	YDR541C	Q03049	344 aa		3.11	□□□□□ -1.91
PIB1	YDR313C	YMR010W	Q03687	405 aa		3.11	□□□□□ -1.91
PIB1	YDR313C	YHC1	Q05900	231 aa	Known RBP	3.11	□□□□□ -1.91
PIB1	YDR313C	SKI3	P17883	1432 aa	Known RBP	3.1	□□□□□ -1.91
PIB1	YDR313C	PDE2	P06776	526 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	ASP3-2	P0CX77	362 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	ASP3-3	P0CX78	362 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	ASP3-4	P0CX79	362 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	ASP3-1	P0CZ17	362 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	YER184C	P39961	794 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	RTT102	P53330	157 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	CWC22	P53333	577 aa	Known RBP	3.1	□□□□□ -1.91
PIB1	YDR313C	PRP38	Q00723	242 aa	Predicted RBP	3.1	□□□□□ -1.91
PIB1	YDR313C	ECM7	Q06200	448 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	AAD15	Q08361	143 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	MCT1	Q12283	360 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	YPS3	Q12303	508 aa		3.1	□□□□□ -1.91
PIB1	YDR313C	RPS19A	P07280	144 aa	Known RBP	3.09	□□□□□ -1.91
PIB1	YDR313C	RPS19B	P07281	144 aa	Predicted RBP	3.09	□□□□□ -1.91
PIB1	YDR313C	MAS2	P11914	482 aa		3.09	□□□□□ -1.91
PIB1	YDR313C	LDS1	P31379	325 aa		3.09	□□□□□ -1.91
PIB1	YDR313C	PFS2	P42841	465 aa	Known RBP	3.09	□□□□□ -1.91
PIB1	YDR313C	PMT5	P52867	743 aa		3.09	□□□□□ -1.91
PIB1	YDR313C	YGR067C	P53243	804 aa		3.09	□□□□□ -1.91
PIB1	YDR313C	HST1	P53685	503 aa		3.09	□□□□□ -1.91
PIB1	YDR313C	VAC7	P53950	1165 aa		3.09	□□□□□ -1.91
PIB1	YDR313C	OPI3	P05375	206 aa		3.08	□□□□□ -1.92
PIB1	YDR313C	PUT4	P15380	627 aa		3.08	□□□□□ -1.92
PIB1	YDR313C	YSC83	P32792	385 aa		3.08	□□□□□ -1.92
PIB1	YDR313C	WSS1	P38838	269 aa		3.08	□□□□□ -1.92
PIB1	YDR313C	SEC27	P41811	889 aa	Known RBP	3.08	□□□□□ -1.92
PIB1	YDR313C	SEH1	P53011	349 aa	Known RBP	3.08	□□□□□ -1.92
PIB1	YDR313C	ROG1	P53118	685 aa		3.08	□□□□□ -1.92
PIB1	YDR313C	ASA1	Q06822	443 aa		3.08	□□□□□ -1.92
PIB1	YDR313C	NOP6	Q07623	225 aa	Known RBP	3.08	□□□□□ -1.92
PIB1	YDR313C	LDS2	Q08218	356 aa		3.08	□□□□□ -1.92
PIB1	YDR313C	RNA1	P11745	407 aa	Known RBP	3.07	□□□□□ -1.92
PIB1	YDR313C	RRP7	P25368	297 aa	Predicted RBP	3.07	□□□□□ -1.92
PIB1	YDR313C	TPS2	P31688	896 aa	Known RBP	3.07	□□□□□ -1.92
PIB1	YDR313C	ASN2	P49090	572 aa	Known RBP	3.07	□□□□□ -1.92
PIB1	YDR313C	ERO1	Q03103	563 aa		3.07	□□□□□ -1.92
PIB1	YDR313C	YLR177W	Q06251	628 aa		3.07	□□□□□ -1.92
PIB1	YDR313C	CHA1	P25379	360 aa	Known RBP	3.06	□□□□□ -1.92
PIB1	YDR313C	TOA1	P32773	286 aa		3.06	□□□□□ -1.92
PIB1	YDR313C	SHE3	P38272	425 aa	Known RBP	3.06	□□□□□ -1.92
PIB1	YDR313C	ECM34	P38728	170 aa		3.06	□□□□□ -1.92
PIB1	YDR313C	CIN2	P46670	268 aa		3.06	□□□□□ -1.92
PIB1	YDR313C	CIK1	Q01649	594 aa		3.06	□□□□□ -1.92
PIB1	YDR313C	MRPL8	P22353	238 aa		3.05	□□□□□ -1.92
PIB1	YDR313C	RPL16A	P26784	199 aa	Known RBP	3.05	□□□□□ -1.92
PIB1	YDR313C	CYM1	P32898	989 aa		3.05	□□□□□ -1.92
PIB1	YDR313C	ABM1	P47146	123 aa		3.05	□□□□□ -1.92
PIB1	YDR313C	TCB3	Q03640	1545 aa	Known RBP	3.04	□□□□□ -1.92
PIB1	YDR313C	HEM4	P06174	275 aa		3.04	□□□□□ -1.92
PIB1	YDR313C	WSC4	P38739	605 aa		3.04	□□□□□ -1.92
PIB1	YDR313C	FRT2	P39734	528 aa		3.04	□□□□□ -1.92
PIB1	YDR313C	COQ5	P49017	307 aa		3.04	□□□□□ -1.92
PIB1	YDR313C	YDR115W	Q04598	105 aa		3.04	□□□□□ -1.92
PIB1	YDR313C	FSH2	Q05015	223 aa		3.04	□□□□□ -1.92
PIB1	YDR313C	SLF1	Q12034	447 aa	Known RBP	3.04	□□□□□ -1.92
PIB1	YDR313C	GPM3	Q12326	303 aa		3.04	□□□□□ -1.92
PIB1	YDR313C	UNG1	P12887	359 aa		3.03	□□□□□ -1.92
PIB1	YDR313C	ANP1	P32629	500 aa		3.03	□□□□□ -1.92
PIB1	YDR313C	KAP104	P38217	918 aa	Known RBP	3.03	□□□□□ -1.92
PIB1	YDR313C	IGO1	P53897	168 aa		3.03	□□□□□ -1.92
PIB1	YDR313C	RNH201	P53942	307 aa		3.03	□□□□□ -1.92
PIB1	YDR313C	SRN2	Q99176	213 aa		3.03	□□□□□ -1.92
PIB1	YDR313C	EPT1	P22140	391 aa		3.02	□□□□□ -1.93
PIB1	YDR313C	PDC2	P32896	925 aa		3.02	□□□□□ -1.93
PIB1	YDR313C	COS9	P36034	407 aa		3.02	□□□□□ -1.93
PIB1	YDR313C	SRP72	P38688	640 aa	Known RBP	3.02	□□□□□ -1.93
PIB1	YDR313C	YML6	P51998	286 aa		3.02	□□□□□ -1.93
PIB1	YDR313C	VPS9	P54787	451 aa		3.02	□□□□□ -1.93
PIB1	YDR313C	IPK1	Q06667	281 aa		3.02	□□□□□ -1.93
PIB1	YDR313C	SRO7	Q12038	1033 aa		3.02	□□□□□ -1.93
PIB1	YDR313C	YDL109C	Q12103	647 aa		3.02	□□□□□ -1.93
PIB1	YDR313C	RFM1	Q12192	310 aa		3.02	□□□□□ -1.93
PIB1	YDR313C	TIR4	Q12218	487 aa	Predicted RBP	3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms