RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 KRT27Q7Z3Y8 459 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 PROCA1Q8NCQ7 364 aaPredicted RBP8.88□□□□□ -0.99
NECAP1-227ENST00000640648 SEPT8Q92599 483 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 OSBP2Q969R2 916 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 PAWRQ96IZ0 340 aaKnown RBP8.88□□□□□ -0.99
NECAP1-227ENST00000640648 NAP1L4Q99733 375 aaKnown RBP8.88□□□□□ -0.99
NECAP1-227ENST00000640648 TRIM15Q9C019 465 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 LRWD1Q9UFC0 647 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 LCMT1Q9UIC8 334 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 POTEFA5A3E0 1075 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 FKBP6O75344 327 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 ZMYND10O75800 440 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 RPL13P26373 211 aaKnown RBP8.88□□□□□ -0.99
NECAP1-227ENST00000640648 KIF23Q02241 960 aaPredicted RBP8.88□□□□□ -0.99
NECAP1-227ENST00000640648 DSG1Q02413 1049 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 TRIM16LQ309B1 348 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 PDCD4Q53EL6 469 aaKnown RBP8.88□□□□□ -0.99
NECAP1-227ENST00000640648 HDAC7Q8WUI4 952 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 EDEM3Q9BZQ6 932 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 EHMT1Q9H9B1 1298 aa8.88□□□□□ -0.99
NECAP1-227ENST00000640648 THRAP3Q9Y2W1 955 aaKnown RBP8.88□□□□□ -0.99
NECAP1-227ENST00000640648 CD151P48509 253 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 MDM2Q00987 491 aaPredicted RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 HERC4Q5GLZ8 1057 aaPredicted RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 PRR23CQ6ZRP0 262 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 RBM43Q6ZSC3 357 aaKnown RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 ZNF804AQ7Z570 1209 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 AIPL1Q9NZN9 384 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 FAM25AB3EWG3 89 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 FAM25CB3EWG5 89 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 FAM25GB3EWG6 89 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 RIMBP2O15034 1052 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 SH3BP5O60239 455 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 SCG2P13521 617 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 EEF2P13639 858 aaKnown RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 ATP6V1C1P21283 382 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 HIBADHP31937 336 aaKnown RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 PTPN12Q05209 780 aaKnown RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 NR5A1Q13285 461 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 TOB2Q14106 344 aaPredicted RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 CNGA3Q16281 694 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 LACTB2Q53H82 288 aaPredicted RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 ATAD3BQ5T9A4 648 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 POTEAQ6S8J7 498 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 TPTE2Q6XPS3 522 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 PRR23BQ6ZRT6 265 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 CABP7Q86V35 215 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 CCDC105Q8IYK2 499 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 SYMPKQ92797 1274 aaKnown RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 BTG4Q9NY30 223 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 KCNG1Q9UIX4 513 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 ZBTB21Q9ULJ3 1066 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 GOLGA8RI6L899 631 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 HAUS5O94927 633 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 ANXA13P27216 316 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 TRPC1P48995 793 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 BCAMP50895 628 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 RAB27AP51159 221 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 CCNHP51946 323 aaPredicted RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 PTGDRQ13258 359 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 XRCC4Q13426 336 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 SLC5A9Q2M3M2 681 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 ATG16L1Q676U5 607 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 MTHFD1LQ6UB35 978 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 ANKRD36BP1Q96IX9 119 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 PAGR1Q9BTK6 254 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 METTL14Q9HCE5 456 aaKnown RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 SAMSN1Q9NSI8 373 aaKnown RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 SPATA7Q9P0W8 599 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 ZFP69BQ9UJL9 534 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 SERPINA10Q9UK55 444 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 ADGRA3Q8IWK6 1321 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 IQANK1A0A1B0GTG1 560 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 SHOX2O60902 331 aaPredicted RBP8.87□□□□□ -0.99
NECAP1-227ENST00000640648 RASSF3Q86WH2 238 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 CD302Q8IX05 232 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 CNBD2Q96M20 576 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 PKD2L1Q9P0L9 805 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 ZNF212Q9UDV6 495 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 SYNPO2Q9UMS6 1093 aa8.87□□□□□ -0.99
NECAP1-227ENST00000640648 USP27XA6NNY8 438 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 TTC4O95801 387 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 PMS2P54278 862 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 CACNA2D1P54289 1103 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 MIS18BP1Q6P0N0 1132 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 GSTA5Q7RTV2 222 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 GPKOWQ92917 476 aaPredicted RBP eCLIP8.86□□□□□ -0.99
NECAP1-227ENST00000640648 CCDC124Q96CT7 223 aaKnown RBP8.86□□□□□ -0.99
NECAP1-227ENST00000640648 ITPKCQ96DU7 683 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 PLEKHG4BQ96PX9 1271 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 CUEDC2Q9H467 287 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 ZNF446Q9NWS9 450 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 STMN3Q9NZ72 180 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 ATP7BP35670 1465 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 GIPC1O14908 333 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 SUPT3HO75486 399 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 PTK2BQ14289 1009 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 UNC13DQ70J99 1090 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 PARD3BQ8TEW8 1205 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 INPP5DQ92835 1189 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms