RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	NOP56	O00567	594 aa	Known RBP	11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	HIP1R	O75146	1068 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	ZNF18	P17022	549 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	STAT5B	P51692	787 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	SOX10	P56693	466 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	OTUD6A	Q7L8S5	288 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	TRIM50	Q86XT4	487 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	MYOCD	Q8IZQ8	938 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	DAW1	Q8N136	415 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	SCFD1	Q8WVM8	642 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	GPR20	Q99678	358 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	SRRT	Q9BXP5	876 aa	Known RBP	11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	XPO4	Q9C0E2	1151 aa	Known RBP	11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	PARVG	Q9HBI0	331 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	GPRC5C	Q9NQ84	441 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	SLC5A4	Q9NY91	659 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	GJD2	Q9UKL4	321 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	PLXNB2	O15031	1838 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	DOCK3	Q8IZD9	2030 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	IGKV6D-21	A0A0A0MT36	114 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	MYB	P10242	640 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	CCNE1	P24864	410 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	GUCY2C	P25092	1073 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	NMT1	P30419	496 aa	Known RBP	11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	CYP2C19	P33261	490 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	ACVR2B	Q13705	512 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	TTI2	Q6NXR4	508 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	DRC7	Q8IY82	874 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	GUF1	Q8N442	669 aa	Known RBP	11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	GLG1	Q92896	1179 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	TRIM47	Q96LD4	638 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	DUSP9	Q99956	384 aa	Known RBP	11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	VTA1	Q9NP79	307 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	ANKEF1	Q9NU02	776 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	KCND2	Q9NZV8	630 aa		11.59	□□□□□ -0.55
NECAP1-223	ENST00000640091	DKC1	O60832	514 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	PRPF6	O94906	941 aa	Known RBP	11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	ALDH1A1	P00352	501 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	MARK3	P27448	753 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	PSMC4	P43686	418 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	UBASH3A	P57075	661 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	KCNA1	Q09470	495 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	MAPK7	Q13164	816 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	CCDC144B	Q3MJ40	725 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	MTERF2	Q49AM1	385 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	COBLL1	Q53SF7	1204 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	XKR3	Q5GH77	459 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	ODR4	Q5SWX8	454 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	CENPP	Q6IPU0	288 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	KSR1	Q8IVT5	923 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	CSGALNACT2	Q8N6G5	542 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	USP6NL	Q92738	828 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	GTPBP4	Q9BZE4	634 aa	Known RBP	11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	ABHD16B	Q9H3Z7	469 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	CYP26B1	Q9NR63	512 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	IGSF9B	Q9UPX0	1349 aa		11.58	□□□□□ -0.56
NECAP1-223	ENST00000640091	ADCY6	O43306	1168 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	TRPA1	O75762	1119 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	GCNT3	O95395	438 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	SMPD1	P17405	629 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	CAP1	Q01518	475 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	ARHGAP1	Q07960	439 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	FAM102B	Q5T8I3	360 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	CDKAL1	Q5VV42	579 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	IRF2BP1	Q8IU81	584 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	IKZF4	Q9H2S9	585 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	AZI2	Q9H6S1	392 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	NRBP1	Q9UHY1	535 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	ODF2L	Q9ULJ1	636 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	RBM47	A0AV96	593 aa	Known RBP	11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	BICDL2	A1A5D9	508 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	OAT	P04181	439 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	GAP43	P17677	238 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	HOXD13	P35453	343 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	ZNF131	P52739	623 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	LACTB	P83111	547 aa	Predicted RBP	11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	FAM178B	Q8IXR5	827 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	FIZ1	Q96SL8	496 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	RTN4	Q9NQC3	1192 aa	Known RBP	11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	LRRC37A2	A6NM11	1700 aa		11.57	□□□□□ -0.56
NECAP1-223	ENST00000640091	PLXNA1	Q9UIW2	1896 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	NKRF	O15226	690 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	GH1	P01241	217 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	PTMA	P06454	111 aa	Known RBP	11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	HOXC6	P09630	235 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	RGS2	P41220	211 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	PPP1R2	P41236	205 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	VEGFB	P49765	207 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	LAMC2	Q13753	1193 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	FAM160B1	Q5W0V3	765 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	ZNF720	Q7Z2F6	126 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	AFG1L	Q8WV93	481 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	MRFAP1L1	Q96HT8	127 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	OLFML3	Q9NRN5	406 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	GABRQ	Q9UN88	632 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	BRCA2	P51587	3418 aa		11.56	□□□□□ -0.56
NECAP1-223	ENST00000640091	KCNJ18	B7U540	433 aa		11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms