RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 POTEJP0CG39 1038 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 KCNMA1Q12791 1236 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 NIPA1Q7RTP0 329 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 TRIM59Q8IWR1 403 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 ANKRD13AQ8IZ07 590 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 NEK11Q8NG66 645 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 BAP1Q92560 729 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 RIT2Q99578 217 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 REEP2Q9BRK0 252 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 LACRTQ9GZZ8 138 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 TUFT1Q9NNX1 390 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 A1CFQ9NQ94 594 aaKnown RBP16.62■□□□□ 0.25
TRIM3-215ENST00000639856 ARHGAP20Q9P2F6 1191 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 MYO6Q9UM54 1294 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 A0A0G2JMZ2 1700 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 MYPNQ86TC9 1320 aa16.62■□□□□ 0.25
TRIM3-215ENST00000639856 RCCD1A6NED2 376 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 EYA4O95677 639 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 ERO1BQ86YB8 467 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 BANK1Q8NDB2 785 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 PARD6BQ9BYG5 372 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 BCAS3Q9H6U6 928 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 ACAD9Q9H845 621 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 KIAA1217Q5T5P2 1943 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 A0A0G2JLL6 359 aaPredicted RBP16.61■□□□□ 0.25
TRIM3-215ENST00000639856 LRRC53A6NM62 1247 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 RSPH10B2B2RC85 870 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 PLEKP08567 350 aaPredicted RBP16.61■□□□□ 0.25
TRIM3-215ENST00000639856 RSPH10BP0C881 870 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 VAV2P52735 878 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 PPATQ06203 517 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 SPA17Q15506 151 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 RRAGAQ7L523 313 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 PRRT2Q7Z6L0 340 aaPredicted RBP16.61■□□□□ 0.25
TRIM3-215ENST00000639856 CCDC155Q8N6L0 562 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 CYP39A1Q9NYL5 469 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 BTBD7Q9P203 1132 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 FHOD1Q9Y613 1164 aa16.61■□□□□ 0.25
TRIM3-215ENST00000639856 TESPA1A2RU30 521 aaPredicted RBP16.6■□□□□ 0.25
TRIM3-215ENST00000639856 SPDYE5A6NIY4 337 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 ZNF263O14978 683 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 ATP9AO75110 1047 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 CASP5P51878 434 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 CYP27A1Q02318 531 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 ADAM9Q13443 819 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 CACNA2D4Q7Z3S7 1137 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 SFR1Q86XK3 245 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
TRIM3-215ENST00000639856 LXNQ9BS40 222 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 FAM184BQ9ULE4 1060 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.6■□□□□ 0.25
TRIM3-215ENST00000639856 LCA5LO95447 670 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 NR3C2P08235 984 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 PNMA6AP0CW24 399 aaPredicted RBP16.6■□□□□ 0.25
TRIM3-215ENST00000639856 KIF5AQ12840 1032 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 EPHA7Q15375 998 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 LBX2Q6XYB7 198 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 EPM2AIP1Q7L775 607 aaPredicted RBP16.6■□□□□ 0.25
TRIM3-215ENST00000639856 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 TSGA10Q9BZW7 698 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 TRAF3IP3Q9Y228 551 aa16.6■□□□□ 0.25
TRIM3-215ENST00000639856 ZC3H4Q9UPT8 1303 aaKnown RBP16.59■□□□□ 0.25
TRIM3-215ENST00000639856 CTAGE15A4D2H0 777 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 CETN3O15182 167 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 TFRCP02786 760 aaKnown RBP16.59■□□□□ 0.25
TRIM3-215ENST00000639856 CTAGE8P0CG41 777 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 KIF11P52732 1056 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 KNOP1Q1ED39 458 aaKnown RBP16.59■□□□□ 0.25
TRIM3-215ENST00000639856 RINT1Q6NUQ1 792 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 PDXDC1Q6P996 788 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 MIER3Q7Z3K6 550 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 CTAGE6Q86UF2 777 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 VSIG10LQ86VR7 867 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 CTAGE4Q8IX94 777 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 CEP72Q9P209 647 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 DOCK5Q9H7D0 1870 aa16.59■□□□□ 0.25
TRIM3-215ENST00000639856 IQCA1LA6NCM1 817 aa16.58■□□□□ 0.25
TRIM3-215ENST00000639856 ATP8B1O43520 1251 aa16.58■□□□□ 0.25
TRIM3-215ENST00000639856 NR2F2P24468 414 aa16.58■□□□□ 0.25
TRIM3-215ENST00000639856 EIF4A3P38919 411 aaKnown RBP16.58■□□□□ 0.25
TRIM3-215ENST00000639856 PAPD7Q5XG87 772 aaKnown RBP16.58■□□□□ 0.25
TRIM3-215ENST00000639856 CC2D1AQ6P1N0 951 aaPredicted RBP16.58■□□□□ 0.25
TRIM3-215ENST00000639856 PROCA1Q8NCQ7 364 aaPredicted RBP16.58■□□□□ 0.25
TRIM3-215ENST00000639856 OPTNQ96CV9 577 aa16.58■□□□□ 0.25
TRIM3-215ENST00000639856 IFIH1Q9BYX4 1025 aaKnown RBP16.58■□□□□ 0.25
TRIM3-215ENST00000639856 NUCKS1Q9H1E3 243 aaKnown RBP16.58■□□□□ 0.25
TRIM3-215ENST00000639856 DEF6Q9H4E7 631 aa16.58■□□□□ 0.25
TRIM3-215ENST00000639856 CCDC151A5D8V7 595 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 POTEB2H3BUK9 544 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 ENC1O14682 589 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 USO1O60763 962 aaKnown RBP16.58■□□□□ 0.24
TRIM3-215ENST00000639856 RGS20O76081 388 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 NOL4O94818 638 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 CCND2P30279 289 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 HOXD13P35453 343 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 MSANTD4Q8NCY6 345 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 NSUN6Q8TEA1 469 aaKnown RBP16.58■□□□□ 0.24
TRIM3-215ENST00000639856 ANKZF1Q9H8Y5 726 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 KCNH4Q9UQ05 1017 aa16.58■□□□□ 0.24
TRIM3-215ENST00000639856 PCDHA13Q9Y5I0 950 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms