RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 PALM3A6NDB9 673 aaPredicted RBP16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 CLDN3O15551 220 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 MYCP01106 439 aaPredicted RBP16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 NMT1P30419 496 aaKnown RBP16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 KRT76Q01546 638 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 DHX9Q08211 1270 aaKnown RBP16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 NFX1Q12986 1120 aaKnown RBP16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 CCDC13Q8IYE1 715 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 TYW1Q9NV66 732 aaKnown RBP16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 CEP72Q9P209 647 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 LRRD1A4D1F6 860 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 STXBP3O00186 592 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 CHP1Q99653 195 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 SPATA31A6Q5VVP1 1343 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 PPFIA4O75335 1185 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 SLCO1A2P46721 670 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 CASP7P55210 303 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 CYFIP1Q7L576 1253 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 TBC1D31Q96DN5 1066 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 HDAC6Q9UBN7 1215 aa16.08■□□□□ 0.16
KCNMA1-262ENST00000639489 GOLGA8KD6RF30 607 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 FGGP02679 453 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 NFIAQ12857 509 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 ORC2Q13416 577 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 ALCAMQ13740 583 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 RAB3IL1Q8TBN0 382 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 P3H4Q92791 437 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 KCNF1Q9H3M0 494 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 RNF40O75150 1001 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 MTMR2Q13614 643 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 ANKRD20A3Q5VUR7 823 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 RPAP3Q9H6T3 665 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 DNAJC17Q9NVM6 304 aaKnown RBP16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 PRR12Q9ULL5 1215 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 PDIA5Q14554 519 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 HHIPL2Q6UWX4 724 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 SMC1BQ8NDV3 1235 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 NSMCE1Q8WV22 266 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 MRPL47Q9HD33 250 aaKnown RBP16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 RNF181Q9P0P0 153 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 TUBE1Q9UJT0 475 aa16.07■□□□□ 0.16
KCNMA1-262ENST00000639489 CASP8Q14790 479 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 NAALADL2Q58DX5 795 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 C3orf67Q6ZVT6 689 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 ENGASEQ8NFI3 743 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 RNF14Q9UBS8 474 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 MKRN1Q9UHC7 482 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 FGFR2P21802 821 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 YWHAGP61981 247 aaKnown RBP eCLIP16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 KCNB1Q14721 858 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 RFX6Q8HWS3 928 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 MICALL2Q8IY33 904 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 KCNB2Q92953 911 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 TRIM11Q96F44 468 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 WDR24Q96S15 920 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 ATP6V0A4Q9HBG4 840 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 A6NJR5 290 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 GYS1P13807 737 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 FXR1P51114 621 aaKnown RBP eCLIP16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 DPYDQ12882 1025 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 MAPK6Q16659 721 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 C10orf76Q5T2E6 689 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 ADSSL1Q8N142 457 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 TMEM39BQ9GZU3 492 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 JMJD4Q9H9V9 463 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 CNOT7Q9UIV1 285 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 NFU1Q9UMS0 254 aa16.06■□□□□ 0.16
KCNMA1-262ENST00000639489 MYMKA6NI61 221 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 GABPAQ06546 454 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 OR6B2Q6IFH4 312 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 ARHGEF2Q92974 986 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 FAM193BQ96PV7 902 aaPredicted RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 RPF1Q9H9Y2 349 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 PACSIN2Q9UNF0 486 aaPredicted RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 XPOTO43592 962 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 NCK2O43639 380 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 KRT1P04264 644 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 HOXA7P31268 230 aaPredicted RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 DRAP1Q14919 205 aaPredicted RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 RSRC2Q7L4I2 434 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 PBKQ96KB5 322 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 FBXO40Q9UH90 709 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 I3L4J1 428 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 ECEL1O95672 775 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 PNMA6AP0CW24 399 aaPredicted RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 HAUS1Q96CS2 278 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 FAM114A2Q9NRY5 505 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 NYAP2Q9P242 653 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 ANAPC7Q9UJX3 599 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 SAT1P21673 171 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 CCT5P48643 541 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 SARNPP82979 210 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 KIF22Q14807 665 aa16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 E4F1Q66K89 784 aaPredicted RBP16.05■□□□□ 0.16
KCNMA1-262ENST00000639489 SLFN12LQ6IEE8 588 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms