RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 TEKT3Q9BXF9 490 aa17.58■□□□□ 0.4
PTPRVP-204ENST00000639439 DISC1Q9NRI5 854 aa17.58■□□□□ 0.4
PTPRVP-204ENST00000639439 PADI3Q9ULW8 664 aa17.58■□□□□ 0.4
PTPRVP-204ENST00000639439 SPTBN5Q9NRC6 3674 aaKnown RBP17.58■□□□□ 0.4
PTPRVP-204ENST00000639439 SIP14410 1827 aa17.58■□□□□ 0.4
PTPRVP-204ENST00000639439 STK36Q9NRP7 1315 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 ZBTB42B2RXF5 422 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 M0R2N6 131 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 MAGEB2O15479 319 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 PFKFB2O60825 505 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 SCRN1Q12765 414 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 NONOQ15233 471 aaKnown RBP eCLIP17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 LRCH2Q5VUJ6 765 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 KRT25Q7Z3Z0 450 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 TMEM192Q8IY95 271 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 RDM1Q8NG50 284 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 NRBP2Q9NSY0 501 aa17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 COL4A4P53420 1690 aaPredicted RBP17.57■□□□□ 0.4
PTPRVP-204ENST00000639439 ADGRA3Q8IWK6 1321 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 TTC3P53804 2025 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 H3BNC9 293 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 C22orf31O95567 290 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 RB1P06400 928 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 STAG3L1P0CL83 205 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 GPM6BQ13491 265 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 NPY5RQ15761 445 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 NPAS4Q8IUM7 802 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 ADAMTS19Q8TE59 1207 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 MRPL38Q96DV4 380 aaKnown RBP17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 RC3H2Q9HBD1 1191 aaKnown RBP17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 TPCN1Q9ULQ1 816 aa17.56■□□□□ 0.4
PTPRVP-204ENST00000639439 TNFRSF10AO00220 468 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 RPS6KA5O75582 802 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 OATP04181 439 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 TMOD1P28289 359 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 CRYBB1P53674 252 aaPredicted RBP17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 TFF2Q03403 129 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 BTG3Q14201 252 aaPredicted RBP17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 TIGD5Q53EQ6 642 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 METTL13Q8N6R0 699 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 LINC01599Q8WXQ3 324 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 WASF1Q92558 559 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 ZNF689Q96CS4 500 aaPredicted RBP17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 MBOAT7Q96N66 472 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 AIFM3Q96NN9 605 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 UHRF1Q96T88 793 aaPredicted RBP17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 PHF20Q9BVI0 1012 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 GINS2Q9Y248 185 aa17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 MYH9P35579 1960 aaKnown RBP17.55■□□□□ 0.4
PTPRVP-204ENST00000639439 CCDC194A0A1B0GVG4 234 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 C5orf67F2Z3F1 127 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 GPR182O15218 404 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 CHMP2AO43633 222 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 PSMD10O75832 226 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 DGKIO75912 1065 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 TDP2O95551 362 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 BMP1P13497 986 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 CTNNB1P35222 781 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 BMPR1AP36894 532 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 NFX1Q12986 1120 aaKnown RBP17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 TRMT1LQ7Z2T5 733 aaKnown RBP17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 RTN4RL1Q86UN2 441 aaPredicted RBP17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 CLP1Q92989 425 aaKnown RBP17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 MAP7D2Q96T17 732 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 C11orf84Q9BUA3 381 aaPredicted RBP17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 UNC45AQ9H3U1 944 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 ERVK-5Q9HDB9 667 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 KCNJ14Q9UNX9 436 aa17.54■□□□□ 0.4
PTPRVP-204ENST00000639439 BRWD1Q9NSI6 2320 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 ZNF862O60290 1169 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 AK2P54819 239 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 PRKCEQ02156 737 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 TMEM266Q2M3C6 531 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 MIER3Q7Z3K6 550 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 CMTR2Q8IYT2 770 aaKnown RBP17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 CRIPAKQ8N1N5 446 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 NAP1L4Q99733 375 aaKnown RBP17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 LMAN2LQ9H0V9 348 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 TMX1Q9H3N1 280 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 C1orf112Q9NSG2 853 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 DDX25Q9UHL0 483 aaKnown RBP17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 LRFN2Q9ULH4 789 aa17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 NOC2LQ9Y3T9 749 aaKnown RBP17.53■□□□□ 0.4
PTPRVP-204ENST00000639439 GCFC2P16383 781 aaKnown RBP17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 SARSP49591 514 aaKnown RBP17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 INF2Q27J81 1249 aa17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 KIZQ2M2Z5 673 aa17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 EFCAB12Q6NXP0 572 aa17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 B3GNT9Q6UX72 402 aa17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 NEK8Q86SG6 692 aa17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 ETNPPLQ8TBG4 499 aa17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 PLVAPQ9BX97 442 aa17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 CDHR5Q9HBB8 845 aa17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 ST3GAL5Q9UNP4 418 aa17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 AKT3Q9Y243 479 aa17.52■□□□□ 0.4
PTPRVP-204ENST00000639439 REV3LO60673 3130 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms