RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 ZNF654Q8IZM8 581 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 FIBCD1Q8N539 461 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 NCOA7Q8NI08 942 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 SMARCC2Q8TAQ2 1214 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 CUL5Q93034 780 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 P2RX5Q93086 422 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 RRP36Q96EU6 259 aaKnown RBP6.31□□□□□ -1.4
PDE4D-229ENST00000638939 LZTS2Q9BRK4 669 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 UPF3BQ9BZI7 483 aaKnown RBP6.31□□□□□ -1.4
PDE4D-229ENST00000638939 BCAS3Q9H6U6 928 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 LY9Q9HBG7 655 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 SENP2Q9HC62 589 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 SEC63Q9UGP8 760 aaKnown RBP6.31□□□□□ -1.4
PDE4D-229ENST00000638939 MTCL1Q9Y4B5 1905 aaKnown RBP6.31□□□□□ -1.4
PDE4D-229ENST00000638939 IGSF9BQ9UPX0 1349 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 FSD2A1L4K1 749 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 SGSM2O43147 1006 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 MBTPS2O43462 519 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 DGKIO75912 1065 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 ITGB5P18084 799 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 RFX1P22670 979 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 IRS1P35568 1242 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 BMPR1AP36894 532 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 GNAQP50148 359 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 ANTXR2P58335 489 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 MRPS6P82932 125 aaKnown RBP6.3□□□□□ -1.4
PDE4D-229ENST00000638939 PTH1RQ03431 593 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 HYAL1Q12794 435 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 MTMR1Q13613 665 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 GRIK4Q16099 956 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 NAALADL2Q58DX5 795 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 HERC4Q5GLZ8 1057 aaPredicted RBP6.3□□□□□ -1.4
PDE4D-229ENST00000638939 MARCH8Q5T0T0 291 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 USP17L6PQ6QN14 398 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 NPAS4Q8IUM7 802 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 CMTR2Q8IYT2 770 aaKnown RBP6.3□□□□□ -1.4
PDE4D-229ENST00000638939 CRIPAKQ8N1N5 446 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 CTCFLQ8NI51 663 aaPredicted RBP6.3□□□□□ -1.4
PDE4D-229ENST00000638939 IGDCC4Q8TDY8 1250 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 LINC01599Q8WXQ3 324 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 PPP2R3CQ969Q6 453 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 FTHL17Q9BXU8 183 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 SMARCAD1Q9H4L7 1026 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 CLDND1Q9NY35 253 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 TELO2Q9Y4R8 837 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 CDY2AQ9Y6F7 541 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 TAF6LQ9Y6J9 622 aa6.3□□□□□ -1.4
PDE4D-229ENST00000638939 NFASCO94856 1347 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 KDM3AQ9Y4C1 1321 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 FRYLO94915 3013 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 DMXL1Q9Y485 3027 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 FAM186AA6NE01 2351 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 RRN3P2A6NIE6 340 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 RBAK-RBAKDNI3L0D1 243 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 GRM6O15303 877 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 MAFGO15525 162 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 ATG7O95352 703 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 EYA4O95677 639 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 CALM1P0DP23 149 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 CALM2P0DP24 149 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 CALM3P0DP25 149 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 CHMLP26374 656 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 SP4Q02446 784 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 NHLH1Q02575 133 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 BTG3Q14201 252 aaPredicted RBP6.29□□□□□ -1.4
PDE4D-229ENST00000638939 UTP14CQ5TAP6 766 aaKnown RBP6.29□□□□□ -1.4
PDE4D-229ENST00000638939 IER5Q5VY09 327 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 PPP1R18Q6NYC8 613 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 FANCMQ8IYD8 2048 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 SMRP1Q8NCR6 262 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 SEPT1Q8WYJ6 367 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 TNPO1Q92973 898 aaKnown RBP6.29□□□□□ -1.4
PDE4D-229ENST00000638939 TMEM87BQ96K49 555 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 MSLNLQ96KJ4 702 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 PSTPIP2Q9H939 334 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 JPH1Q9HDC5 661 aaPredicted RBP6.29□□□□□ -1.4
PDE4D-229ENST00000638939 JADE2Q9NQC1 790 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 RTEL1Q9NZ71 1219 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 CD207Q9UJ71 328 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 TRPV2Q9Y5S1 764 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 UBIAD1Q9Y5Z9 338 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 COL1A2P08123 1366 aa6.29□□□□□ -1.4
PDE4D-229ENST00000638939 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-229ENST00000638939 GSTTP1A0A1W2PQM5 241 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 SPDYE3A6NKU9 549 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 M0QZ92 97 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 SH2B2O14492 632 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-229ENST00000638939 ENPP3O14638 875 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 PRC1O43663 620 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 ATP9AO75110 1047 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 PLEKHA8P1O95397 391 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 STAG3L1P0CL83 205 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 MARK3P27448 753 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 CD52P31358 61 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 LIFRP42702 1097 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 NDUFV1P49821 464 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 SLC26A2P50443 739 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 MCCD1P59942 119 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-229ENST00000638939 UBE3AQ05086 875 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 DLX2Q07687 328 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms