RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 MIER3Q7Z3K6 550 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 KSR1Q8IVT5 923 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 FAM178BQ8IXR5 827 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 FAM133AQ8N9E0 248 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 GINM1Q9NU53 330 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 SEL1LQ9UBV2 794 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 RAB21Q9UL25 225 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 ODF2LQ9ULJ1 636 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 GHRHRQ02643 423 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 RASSF7Q02833 373 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 EXOC3L4Q17RC7 722 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 ZNF720Q7Z2F6 126 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 NEK9Q8TD19 979 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 SYTL5Q8TDW5 730 aaPredicted RBP23.61■■□□□ 1.37
CLN6-224ENST00000638076 PLCB1Q9NQ66 1216 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 AIPL1Q9NZN9 384 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 PPP1R9AQ9ULJ8 1098 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 JRKLQ9Y4A0 524 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 GJA3Q9Y6H8 435 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 ARHGEF35A5YM69 484 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 SASH3O75995 380 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 MRPS9P82933 396 aaKnown RBP23.6■■□□□ 1.37
CLN6-224ENST00000638076 TKFCQ3LXA3 575 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 PCNX4Q63HM2 1172 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 DPY19L2P1Q6NXN4 242 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 NIPA1Q7RTP0 329 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 SLC35C1Q96A29 364 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 CNOT7Q9UIV1 285 aaKnown RBP23.6■■□□□ 1.37
CLN6-224ENST00000638076 BCS1LQ9Y276 419 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 DHX15O43143 795 aaKnown RBP23.6■■□□□ 1.37
CLN6-224ENST00000638076 PLA2G4AP47712 749 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 ODR4Q5SWX8 454 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 NBPF12Q5TAG4 269 aaPredicted RBP23.6■■□□□ 1.37
CLN6-224ENST00000638076 ANKRD13CQ8N6S4 541 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 RPAP3Q9H6T3 665 aaPredicted RBP23.6■■□□□ 1.37
CLN6-224ENST00000638076 SALL4Q9UJQ4 1053 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 UBIAD1Q9Y5Z9 338 aa23.6■■□□□ 1.37
CLN6-224ENST00000638076 UCHL3P15374 230 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 PON1P27169 355 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 KLHL30Q0D2K2 578 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 ENOX2Q16206 610 aaKnown RBP23.59■■□□□ 1.37
CLN6-224ENST00000638076 ASIC2Q16515 512 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 KLHDC7AQ5VTJ3 777 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 TXLNBQ8N3L3 684 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 DRC1Q96MC2 740 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 ALS2CR12Q96Q35 445 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 AGO4Q9HCK5 861 aaKnown RBP23.59■■□□□ 1.37
CLN6-224ENST00000638076 CTDP1Q9Y5B0 961 aaPredicted RBP23.59■■□□□ 1.37
CLN6-224ENST00000638076 ZNF185O15231 689 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 GUCY2CP25092 1073 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 RPS6P62753 249 aaKnown RBP23.59■■□□□ 1.37
CLN6-224ENST00000638076 ITGB3BPQ13352 177 aaPredicted RBP23.59■■□□□ 1.37
CLN6-224ENST00000638076 COG2Q14746 738 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 LONRF2Q1L5Z9 754 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 TAAR1Q96RJ0 339 aa23.59■■□□□ 1.37
CLN6-224ENST00000638076 P4HBP07237 508 aaKnown RBP23.58■■□□□ 1.37
CLN6-224ENST00000638076 EIF2AK2P19525 551 aaKnown RBP23.58■■□□□ 1.37
CLN6-224ENST00000638076 CKAP4Q07065 602 aaKnown RBP23.58■■□□□ 1.37
CLN6-224ENST00000638076 MTMR1Q13613 665 aa23.58■■□□□ 1.37
CLN6-224ENST00000638076 NFIL3Q16649 462 aa23.58■■□□□ 1.37
CLN6-224ENST00000638076 STXBP4Q6ZWJ1 553 aa23.58■■□□□ 1.37
CLN6-224ENST00000638076 SAMM50Q9Y512 469 aa23.58■■□□□ 1.37
CLN6-224ENST00000638076 UBE4BO95155 1302 aa23.58■■□□□ 1.36
CLN6-224ENST00000638076 HIP1RO75146 1068 aa23.58■■□□□ 1.36
CLN6-224ENST00000638076 PSMC2P35998 433 aaKnown RBP23.58■■□□□ 1.36
CLN6-224ENST00000638076 SPP2Q13103 211 aa23.58■■□□□ 1.36
CLN6-224ENST00000638076 SLC18A3Q16572 532 aa23.58■■□□□ 1.36
CLN6-224ENST00000638076 FAM186BQ8IYM0 893 aa23.58■■□□□ 1.36
CLN6-224ENST00000638076 HNRNPLLQ8WVV9 542 aaKnown RBP23.58■■□□□ 1.36
CLN6-224ENST00000638076 BORCS6Q96GS4 357 aa23.58■■□□□ 1.36
CLN6-224ENST00000638076 SPAG5Q96R06 1193 aa23.58■■□□□ 1.36
CLN6-224ENST00000638076 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.58■■□□□ 1.36
CLN6-224ENST00000638076 ST7Q9NRC1 585 aa23.58■■□□□ 1.36
CLN6-224ENST00000638076 MAP3K20Q9NYL2 800 aaKnown RBP23.58■■□□□ 1.36
CLN6-224ENST00000638076 SNX12Q9UMY4 172 aa23.58■■□□□ 1.36
CLN6-224ENST00000638076 BRCA1P38398 1863 aaKnown RBP23.57■■□□□ 1.36
CLN6-224ENST00000638076 USP14P54578 494 aa23.57■■□□□ 1.36
CLN6-224ENST00000638076 PADI6Q6TGC4 694 aa23.57■■□□□ 1.36
CLN6-224ENST00000638076 GBP6Q6ZN66 633 aa23.57■■□□□ 1.36
CLN6-224ENST00000638076 CAGE1Q8TC20 777 aa23.57■■□□□ 1.36
CLN6-224ENST00000638076 FUT8Q9BYC5 575 aa23.57■■□□□ 1.36
CLN6-224ENST00000638076 MTFR1LQ9H019 292 aa23.57■■□□□ 1.36
CLN6-224ENST00000638076 ZHX2Q9Y6X8 837 aa23.57■■□□□ 1.36
CLN6-224ENST00000638076 ZBED4O75132 1171 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 VSNL1P62760 191 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 MAPK7Q13164 816 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 PGM5Q15124 567 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 HS2ST1Q7LGA3 356 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 ADAMTS1Q9UHI8 967 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 A0A087X0T9 212 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 BUB1O43683 1085 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 FAM228BP0C875 321 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 DAW1Q8N136 415 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 RPGRIP1Q96KN7 1286 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 TRERF1Q96PN7 1200 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 ZMYND15Q9H091 742 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 GBP3Q9H0R5 595 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 LUC7LQ9NQ29 371 aaKnown RBP23.56■■□□□ 1.36
CLN6-224ENST00000638076 GCNT4Q9P109 453 aa23.56■■□□□ 1.36
CLN6-224ENST00000638076 PDE2AO00408 941 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms