RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 C6orf50Q9HD87 102 aa8.9□□□□□ -0.98
PNKP-229ENST00000637897 ERVK-5Q9HDB9 667 aa8.9□□□□□ -0.98
PNKP-229ENST00000637897 SH3GLB2Q9NR46 395 aa8.9□□□□□ -0.98
PNKP-229ENST00000637897 HCSTQ9UBK5 93 aa8.9□□□□□ -0.98
PNKP-229ENST00000637897 PADI3Q9ULW8 664 aa8.9□□□□□ -0.98
PNKP-229ENST00000637897 NOC2LQ9Y3T9 749 aaKnown RBP8.9□□□□□ -0.98
PNKP-229ENST00000637897 RRN3P2A6NIE6 340 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 SLC37A4O43826 429 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 HBP1O60381 514 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 PFKFB2O60825 505 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 DGKIO75912 1065 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 AMHP03971 560 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 COL9A1P20849 921 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 DNAJB1P25685 340 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 ZNF76P36508 570 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 MRPS5P82675 430 aaKnown RBP8.89□□□□□ -0.99
PNKP-229ENST00000637897 FGD1P98174 961 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 MAPK8IP2Q13387 824 aaPredicted RBP8.89□□□□□ -0.99
PNKP-229ENST00000637897 TARBP2Q15633 366 aaKnown RBP8.89□□□□□ -0.99
PNKP-229ENST00000637897 ZNF746Q6NUN9 644 aaPredicted RBP8.89□□□□□ -0.99
PNKP-229ENST00000637897 FAM228AQ86W67 206 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 TMEM192Q8IY95 271 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 DAGLBQ8NCG7 672 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 ADAMTS19Q8TE59 1207 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 APBB2Q92870 758 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 CLP1Q92989 425 aaKnown RBP8.89□□□□□ -0.99
PNKP-229ENST00000637897 TNFRSF25Q93038 417 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 PPP1R16BQ96T49 567 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 KIF2CQ99661 725 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 PHF20Q9BVI0 1012 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 CELF4Q9BZC1 486 aaKnown RBP8.89□□□□□ -0.99
PNKP-229ENST00000637897 GLT8D2Q9H1C3 349 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 TSPYL2Q9H2G4 693 aaPredicted RBP8.89□□□□□ -0.99
PNKP-229ENST00000637897 ADAMTS10Q9H324 1103 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 ZNF302Q9NR11 478 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 PDRG1Q9NUG6 133 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 RNF19AQ9NV58 838 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 WRAP73Q9P2S5 460 aaPredicted RBP8.89□□□□□ -0.99
PNKP-229ENST00000637897 GABBR1Q9UBS5 961 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 PCDHA4Q9UN74 947 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 TRPC6Q9Y210 931 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 TRPV2Q9Y5S1 764 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 CYP46A1Q9Y6A2 500 aa8.89□□□□□ -0.99
PNKP-229ENST00000637897 RALGAPA2Q2PPJ7 1873 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 FNDC1Q4ZHG4 1894 aaPredicted RBP8.88□□□□□ -0.99
PNKP-229ENST00000637897 C5orf67F2Z3F1 127 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 H3BNC9 293 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 EML1O00423 815 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 GRM6O15303 877 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 GNA11P29992 359 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 LTBRP36941 435 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 USP11P51784 963 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 CLCN3P51790 818 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 AK2P54819 239 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 DSC3Q14574 896 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 ME3Q16798 604 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 Q4G0T1 1027 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 PDXDC2PQ6P474 469 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 TRMT1LQ7Z2T5 733 aaKnown RBP8.88□□□□□ -0.99
PNKP-229ENST00000637897 BLIDQ8IZY5 108 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 NECAB1Q8N987 351 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.88□□□□□ -0.99
PNKP-229ENST00000637897 HAS1Q92839 578 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 ZNF668Q96K58 619 aaPredicted RBP8.88□□□□□ -0.99
PNKP-229ENST00000637897 SH2D3AQ9BRG2 576 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 AZI2Q9H6S1 392 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 LMCD1Q9NZU5 365 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 RAPGEFL1Q9UHV5 662 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 MRPL42Q9Y6G3 142 aaKnown RBP8.88□□□□□ -0.99
PNKP-229ENST00000637897 SQORQ9Y6N5 450 aa8.88□□□□□ -0.99
PNKP-229ENST00000637897 C5orf42Q9H799 3197 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 COL1A2P08123 1366 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 ADGRA3Q8IWK6 1321 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 C9IYK1 514 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 BACH1O14867 736 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 DEXIO95424 95 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 VTNP04004 478 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 GTF2F1P35269 517 aaKnown RBP eCLIP8.87□□□□□ -0.99
PNKP-229ENST00000637897 SLC26A2P50443 739 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 NLRP5P59047 1200 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 ANAPC15P60006 121 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 FAM189BP81408 668 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 SETQ01105 290 aaPredicted RBP8.87□□□□□ -0.99
PNKP-229ENST00000637897 KRT76Q01546 638 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 DLX2Q07687 328 aaPredicted RBP8.87□□□□□ -0.99
PNKP-229ENST00000637897 SSRP1Q08945 709 aaKnown RBP8.87□□□□□ -0.99
PNKP-229ENST00000637897 INF2Q27J81 1249 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 KIZQ2M2Z5 673 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 TCEAL5Q5H9L2 206 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 ZNF484Q5JVG2 852 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 MIS18BP1Q6P0N0 1132 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 LRRC71Q8N4P6 559 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 ZNF579Q8NAF0 562 aaKnown RBP8.87□□□□□ -0.99
PNKP-229ENST00000637897 FBXO22Q8NEZ5 403 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 BBXQ8WY36 941 aaPredicted RBP8.87□□□□□ -0.99
PNKP-229ENST00000637897 MRPL38Q96DV4 380 aaKnown RBP8.87□□□□□ -0.99
PNKP-229ENST00000637897 YME1L1Q96TA2 773 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 OSMRQ99650 979 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 KCNMB3Q9NPA1 279 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 DISC1Q9NRI5 854 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms