RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 MYH7BA7E2Y1 1941 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 KDM4FA0A1W2PPD8 638 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 C5orf60A6NFR6 353 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 CES2O00748 559 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 BUB1BO60566 1050 aaPredicted RBP21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 MED24O75448 989 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 FLOT1O75955 427 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 AFPP02771 609 aaKnown RBP21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 RFC4P35249 363 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 SLCO1A2P46721 670 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 GALCP54803 685 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 NFIXQ14938 502 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 IFI16Q16666 785 aaKnown RBP21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 ATP8B4Q8TF62 1192 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 TCP11Q8WWU5 503 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 ESYT2A0FGR8 921 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 IFNAR2P48551 515 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 MARSP56192 900 aaKnown RBP21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 PABPC4Q13310 644 aaKnown RBP eCLIP21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 ACCSLQ4AC99 568 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 FAM133BQ5BKY9 247 aaKnown RBP21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 GLYCTKQ8IVS8 523 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 RTFDC1Q9BY42 306 aaPredicted RBP21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 STXBP5LQ9Y2K9 1186 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 CCDC188H7C350 402 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 MMEP08473 750 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 SLURP2P0DP57 97 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 HOXD13P35453 343 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 DDB1Q16531 1140 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 DCAF12L1Q5VU92 463 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 MSL1Q68DK7 614 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 MARCH10Q8NA82 808 aaPredicted RBP21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 PCDHB13Q9Y5F0 798 aa21.97■■□□□ 1.11
CACNA1A-243ENST00000637616 BHMG1C9JSJ3 638 aaPredicted RBP21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 XRCC5P13010 732 aaKnown RBP21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 PSEN1P49768 467 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 MKRN4PQ13434 485 aaPredicted RBP21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 PICALMQ13492 652 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 ERMARDQ5T6L9 678 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 EIF1ADQ8N9N8 165 aaKnown RBP21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 LINC00116Q8NCU8 138 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 WDR66Q8TBY9 1149 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 VEZTQ9HBM0 779 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 IGSF9BQ9UPX0 1349 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 BTNL10A8MVZ5 291 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 TRIM37O94972 964 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 CLEC4GQ6UXB4 293 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 PNMA8AQ86V59 439 aaPredicted RBP21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 ADGRF4Q8IZF3 695 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 JMJD4Q9H9V9 463 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 ZNF287Q9HBT7 754 aa21.96■■□□□ 1.11
CACNA1A-243ENST00000637616 RSPH10B2B2RC85 870 aa21.95■■□□□ 1.11
CACNA1A-243ENST00000637616 CLTAP09496 248 aa21.95■■□□□ 1.11
CACNA1A-243ENST00000637616 RSPH10BP0C881 870 aa21.95■■□□□ 1.11
CACNA1A-243ENST00000637616 ORC2Q13416 577 aaPredicted RBP21.95■■□□□ 1.11
CACNA1A-243ENST00000637616 SFR1Q86XK3 245 aa21.95■■□□□ 1.11
CACNA1A-243ENST00000637616 ELAC2Q9BQ52 826 aaKnown RBP21.95■■□□□ 1.11
CACNA1A-243ENST00000637616 CCDC113Q9H0I3 377 aa21.95■■□□□ 1.11
CACNA1A-243ENST00000637616 AZI2Q9H6S1 392 aa21.95■■□□□ 1.11
CACNA1A-243ENST00000637616 GCNT4Q9P109 453 aa21.95■■□□□ 1.11
CACNA1A-243ENST00000637616 RTCBQ9Y3I0 505 aaKnown RBP21.95■■□□□ 1.11
CACNA1A-243ENST00000637616 SFI1A8K8P3 1242 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 PAEPP09466 180 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 ELF3P78545 371 aaPredicted RBP21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 NBPF9Q3BBW0 867 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 C10orf76Q5T2E6 689 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 TBC1D1Q86TI0 1168 aaPredicted RBP21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 LRRC34Q8IZ02 419 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 RASGEF1CQ8N431 466 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 SLC35G2Q8TBE7 412 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 EPB41L4BQ9H329 900 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 SLITRK6Q9H5Y7 841 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 SEPT11Q9NVA2 429 aaKnown RBP21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 TMOD4Q9NZQ9 345 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 SUCLA2Q9P2R7 463 aaPredicted RBP21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 AMFRQ9UKV5 643 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 CCDC38Q502W7 563 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 KCTD1Q719H9 257 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 CCDC197Q8NCU1 140 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 LNX1Q8TBB1 728 aaPredicted RBP21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 PRMT1Q99873 361 aaKnown RBP21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 CHORDC1Q9UHD1 332 aaPredicted RBP21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 BCS1LQ9Y276 419 aa21.95■■□□□ 1.1
CACNA1A-243ENST00000637616 CCT8L1PA6NM43 557 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 DR1Q01658 176 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 POU5F1Q01860 360 aaKnown RBP21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 XRCC4Q13426 336 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 SLFN11Q7Z7L1 901 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 RNF25Q96BH1 459 aaPredicted RBP21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 TLCD1Q96CP7 247 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 HES6Q96HZ4 224 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 FAM129AQ9BZQ8 928 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 SIX2Q9NPC8 291 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 USP17L10C9JJH3 530 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 PPP4CP60510 307 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 EPHA7Q15375 998 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 LACTB2Q53H82 288 aaPredicted RBP21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 FBXO25Q8TCJ0 367 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 SETDB2Q96T68 719 aa21.94■■□□□ 1.1
CACNA1A-243ENST00000637616 FAM114A2Q9NRY5 505 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms