RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PCDHA12Q9UN75 941 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 GNEQ9Y223 722 aaKnown RBP7.56□□□□□ -1.2
UPF3B-205ENST00000636792 PPME1Q9Y570 386 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 SRPRBQ9Y5M8 271 aaKnown RBP7.56□□□□□ -1.2
UPF3B-205ENST00000636792 MOXD2PA6NHM9 499 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 A6NJR5 290 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 CUTAO60888 179 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 DTNBO60941 627 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 CABYRO75952 493 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 ATG7O95352 703 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 GGPS1O95749 300 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 ELNP15502 786 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 GJA9P57773 515 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 DNM1Q05193 864 aaKnown RBP7.55□□□□□ -1.2
UPF3B-205ENST00000636792 SPIRE1Q08AE8 756 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 DHX37Q8IY37 1157 aaKnown RBP7.55□□□□□ -1.2
UPF3B-205ENST00000636792 C4orf32Q8N8J7 132 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 PCSK9Q8NBP7 692 aaKnown RBP7.55□□□□□ -1.2
UPF3B-205ENST00000636792 AFAP1L1Q8TED9 768 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 HAS1Q92839 578 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 ATP6V0A1Q93050 837 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 ZNF333Q96JL9 665 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 FAM167AQ96KS9 214 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 TSEN34Q9BSV6 310 aaKnown RBP7.55□□□□□ -1.2
UPF3B-205ENST00000636792 NT5C3AQ9H0P0 336 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 AP5M1Q9H0R1 490 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 TTC12Q9H892 705 aaPredicted RBP7.55□□□□□ -1.2
UPF3B-205ENST00000636792 MLXIPQ9HAP2 919 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 TUFT1Q9NNX1 390 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 RCOR1Q9UKL0 485 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 ZNF215Q9UL58 517 aaPredicted RBP7.55□□□□□ -1.2
UPF3B-205ENST00000636792 PCDHGC3Q9UN70 934 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 KAT6AQ92794 2004 aa7.55□□□□□ -1.2
UPF3B-205ENST00000636792 IGSF9BQ9UPX0 1349 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 IGKV6D-21A0A0A0MT36 114 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 A0A1W2PQ27 194 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 A0A1W2PQ64 194 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 A0A1W2PQD8 194 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 NOP56O00567 594 aaKnown RBP7.54□□□□□ -1.2
UPF3B-205ENST00000636792 DHX15O43143 795 aaKnown RBP7.54□□□□□ -1.2
UPF3B-205ENST00000636792 PPFIA4O75335 1185 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 LGR5O75473 907 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 LYPLA2O95372 231 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 ZIC2O95409 532 aaPredicted RBP7.54□□□□□ -1.2
UPF3B-205ENST00000636792 RPLP2P05387 115 aaKnown RBP7.54□□□□□ -1.2
UPF3B-205ENST00000636792 PSAPP07602 524 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 GJB1P08034 283 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 ARP10275 920 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 NCLP19338 710 aaKnown RBP7.54□□□□□ -1.2
UPF3B-205ENST00000636792 RPA1P27694 616 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 ADCYAP1R1P41586 468 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 GSK3AP49840 483 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 ARHGAP1Q07960 439 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 ITGB3BPQ13352 177 aaPredicted RBP7.54□□□□□ -1.2
UPF3B-205ENST00000636792 EPHA7Q15375 998 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 ZNF174Q15697 407 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 DGKDQ16760 1214 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 HYIQ5T013 277 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 FAM160B1Q5W0V3 765 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 ADALQ6DHV7 355 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 MIS18BP1Q6P0N0 1132 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 SEPT14Q6ZU15 432 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 EEPD1Q7L9B9 569 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 RNF180Q86T96 592 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 EXOC8Q8IYI6 725 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 OR6J1Q8NGC5 347 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 LEO1Q8WVC0 666 aaPredicted RBP7.54□□□□□ -1.2
UPF3B-205ENST00000636792 SEPT1Q8WYJ6 367 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 CCDC34Q96HJ3 373 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 POLR3CQ9BUI4 534 aaPredicted RBP7.54□□□□□ -1.2
UPF3B-205ENST00000636792 KLF16Q9BXK1 252 aaPredicted RBP7.54□□□□□ -1.2
UPF3B-205ENST00000636792 CCSER1Q9C0I3 900 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 CUEDC2Q9H467 287 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 MAGEF1Q9HAY2 307 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 XPNPEP3Q9NQH7 507 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 VAV3Q9UKW4 847 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 PCDHA10Q9Y5I2 948 aa7.54□□□□□ -1.2
UPF3B-205ENST00000636792 SYNRGQ9UMZ2 1314 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 FAM237AA0A1B0GTK4 181 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 DNM1LO00429 736 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
UPF3B-205ENST00000636792 ADAMTS4O75173 837 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 ARIH2O95376 493 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 F2P00734 622 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 P4HBP07237 508 aaKnown RBP7.53□□□□□ -1.2
UPF3B-205ENST00000636792 MMP3P08254 477 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 SUPT20HL2P0C7V6 817 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 BMP2P12643 396 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 XRCC6P12956 609 aaKnown RBP eCLIP7.53□□□□□ -1.2
UPF3B-205ENST00000636792 ACTR2P61160 394 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 ARID5BQ14865 1188 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 KRT79Q5XKE5 535 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 DESI1Q6ICB0 168 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 PLPPR4Q7Z2D5 763 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 MIER3Q7Z3K6 550 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 C4orf19Q8IY42 314 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 ARRDC4Q8NCT1 418 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 TRPV1Q8NER1 839 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 CYP2W1Q8TAV3 490 aa7.53□□□□□ -1.2
UPF3B-205ENST00000636792 PRR7Q8TB68 274 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms