RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 MED24O75448 989 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 AKAP3O75969 853 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 H2AFZP0C0S5 128 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 SCP2P22307 547 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 NF2P35240 595 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 GSTO1P78417 241 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 PRPF4BQ13523 1007 aaKnown RBP16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 NFIXQ14938 502 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 EDRF1Q3B7T1 1238 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 TTBK2Q6IQ55 1244 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 H2AFVQ71UI9 128 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 CCDC26Q8TAB7 109 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 TLCD1Q96CP7 247 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 CHMP6Q96FZ7 201 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 HES6Q96HZ4 224 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 XPO6Q96QU8 1125 aaKnown RBP16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 NT5C3AQ9H0P0 336 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 SIX2Q9NPC8 291 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 COL14A1Q05707 1796 aaKnown RBP16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 IGSF9BQ9UPX0 1349 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 hCG_1984214I3L0E3 225 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 XRCC5P13010 732 aaKnown RBP16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 HOXA7P31268 230 aaPredicted RBP16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 SLC16A2P36021 539 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 PRKCIP41743 596 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 CASP4P49662 377 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 CLK2P49760 499 aaKnown RBP16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 XRCC4Q13426 336 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 LACTB2Q53H82 288 aaPredicted RBP16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 HYIQ5T013 277 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 ERMARDQ5T6L9 678 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 ZNF713Q8N859 430 aaPredicted RBP16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 JMJD4Q9H9V9 463 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 GOPCQ9HD26 462 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 BUB1BO60566 1050 aaPredicted RBP16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 GFPT2O94808 682 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 CHN1P15882 459 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 EPHA7Q15375 998 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 ADGRF4Q8IZF3 695 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 LNX1Q8TBB1 728 aaPredicted RBP16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 GLG1Q92896 1179 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 SELENOSQ9BQE4 189 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 TXLNGYQ9BZA5 131 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 FAM129AQ9BZQ8 928 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 MTFR1LQ9H019 292 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 PPP1R9AQ9ULJ8 1098 aa16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 BZW2Q9Y6E2 419 aaKnown RBP16.31■□□□□ 0.2
THUMPD1-206ENST00000636554 ZNF335Q9H4Z2 1342 aaPredicted RBP16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 MEIS1O00470 390 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 PPFIA2O75334 1257 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 TM4SF1P30408 202 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 GALCP54803 685 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 SLC12A3P55017 1021 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 PSMC6P62333 389 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 ZNF211Q13398 564 aaPredicted RBP16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 SFR1Q86XK3 245 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 OLIG1Q8TAK6 271 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 IKZF4Q9H2S9 585 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 FAM114A2Q9NRY5 505 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 DONSONQ9NYP3 566 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 FRMD3A2A2Y4 597 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 SPDYE3A6NKU9 549 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 MMEP08473 750 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 ABCB4P21439 1286 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 JAM2P57087 298 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 ARMC9Q7Z3E5 817 aa16.3■□□□□ 0.2
THUMPD1-206ENST00000636554 USP17L15C9J2P7 530 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 USP17L13C9JLJ4 530 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 USP17L11C9JVI0 530 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 USP17L18D6R9N7 530 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 USP17L22D6RA61 530 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 USP17L17D6RBQ6 530 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 USP17L19D6RCP7 530 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 USP17L20D6RJB6 530 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 ECM2O94769 699 aaPredicted RBP16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 KCNA1Q09470 495 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 USP17L24Q0WX57 530 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 USP17L6PQ6QN14 398 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 FRMD5Q7Z6J6 570 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 GLYCTKQ8IVS8 523 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 CUL5Q93034 780 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 ZNF317Q96PQ6 595 aaPredicted RBP16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 DHX36Q9H2U1 1008 aaKnown RBP16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 ADAM7Q9H2U9 754 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 MTMR4Q9NYA4 1195 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.29■□□□□ 0.22e-8■■■■□ 22.3
THUMPD1-206ENST00000636554 TNRC6CQ9HCJ0 1690 aaKnown RBP16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 TLDC2A0PJX2 215 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 RSPH10B2B2RC85 870 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 TRIM37O94972 964 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 RSPH10BP0C881 870 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 AKR1B1P15121 316 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 NOVP48745 357 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 PSEN1P49768 467 aa16.29■□□□□ 0.2
THUMPD1-206ENST00000636554 PABPC4Q13310 644 aaKnown RBP eCLIP16.29■□□□□ 0.22e-6■□□□□ 11.2
THUMPD1-206ENST00000636554 ASPRV1Q53RT3 343 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms