RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 SRGAP2CP0DJJ0 459 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 RPL13P26373 211 aaKnown RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 DEKP35659 375 aaKnown RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 MC3RP41968 323 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 SLC6A11P48066 632 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 POU5F1BQ06416 359 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 DHX8Q14562 1220 aaKnown RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 MAP9Q49MG5 647 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 FAM47CQ5HY64 1035 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 MROH9Q5TGP6 573 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 EFCAB2Q5VUJ9 269 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 ZKSCAN2Q63HK3 967 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 WWC2Q6AWC2 1192 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 UBE2R2Q712K3 238 aaPredicted RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 DDX46Q7L014 1031 aaKnown RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 PLEKHH3Q7Z736 793 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 DDX53Q86TM3 631 aaKnown RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 ZC3H18Q86VM9 953 aaKnown RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 PRPF38AQ8NAV1 312 aaKnown RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 CHST13Q8NET6 341 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 UHMK1Q8TAS1 419 aaKnown RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 ADAMTS17Q8TE56 1095 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 SH3RF2Q8TEC5 729 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 USP33Q8TEY7 942 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 JDP2Q8WYK2 163 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 ZBTB8AQ96BR9 441 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 WNK4Q96J92 1243 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 LOXL4Q96JB6 756 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 CDK5RAP1Q96SZ6 601 aaKnown RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 PAGR1Q9BTK6 254 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 ANP32EQ9BTT0 268 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 JAM3Q9BX67 310 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 AP5M1Q9H0R1 490 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 CHMP4BQ9H444 224 aaKnown RBP3.67□□□□□ -1.82
PSPC1-208ENST00000635562 EPB41L1Q9H4G0 881 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 SMURF1Q9HCE7 757 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 FRMD4BQ9Y2L6 1034 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 PHLDB1Q86UU1 1377 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 ZNF891A8MT65 544 aaPredicted RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 GSTA4O15217 222 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 NKRFO15226 690 aaKnown RBP eCLIP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 MATN3O15232 486 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 AKAP8O43823 692 aaKnown RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 TADA3O75528 432 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 ZBTB48P10074 688 aaPredicted RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 VDRP11473 427 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 COL6A1P12109 1028 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 ZNF20P17024 532 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 CD53P19397 219 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 CNGA1P29973 690 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 NEK4P51957 841 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 LMOD3Q0VAK6 560 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 MAPRE1Q15691 268 aaKnown RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 GPR19Q15760 415 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 CYP4F22Q6NT55 531 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 GLB1LQ6UWU2 654 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 ETV3LQ6ZN32 361 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 LHFPL2Q6ZUX7 228 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 GET4Q7L5D6 327 aaPredicted RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 NOSTRINQ8IVI9 506 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 TTLL6Q8N841 843 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 CHST14Q8NCH0 376 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 C1orf131Q8NDD1 294 aaKnown RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 SMC1BQ8NDV3 1235 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 SVIPQ8NHG7 77 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 LEO1Q8WVC0 666 aaPredicted RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 DVL3Q92997 716 aaPredicted RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 TRMT2BQ96GJ1 504 aaKnown RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 CHAMP1Q96JM3 812 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 NAP1L4Q99733 375 aaKnown RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 TMX4Q9H1E5 349 aaPredicted RBP3.66□□□□□ -1.82
PSPC1-208ENST00000635562 SLC6A20Q9NP91 592 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 CASS4Q9NQ75 786 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 DUSP10Q9Y6W6 482 aa3.66□□□□□ -1.82
PSPC1-208ENST00000635562 GOLGA6CA6NDK9 693 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 GOLGA6BA6NDN3 693 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 C9orf118A6NHY6 69 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 IFRD1O00458 451 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-208ENST00000635562 GOLIM4O00461 696 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 MAN2B1O00754 1011 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 NEMP1O14524 444 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 SGSM2O43147 1006 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 SUV39H1O43463 412 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 ZEB2O60315 1214 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 BRINP1O60477 761 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 NTRK1P04629 796 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 GOLGA6DP0CG33 693 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 PDE6AP16499 860 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 ATP2A2P16615 1042 aaKnown RBP3.65□□□□□ -1.83
PSPC1-208ENST00000635562 POLD1P28340 1107 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 THBS2P35442 1172 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 ADCYAP1R1P41586 468 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 MMP14P50281 582 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 DNM2P50570 870 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 EPHA5P54756 1037 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 JAM2P57087 298 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 ST5P78524 1137 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 SAFB2Q14151 953 aaKnown RBP eCLIP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms