RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 WRNIP1Q96S55 665 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 PLA2G12BQ9BX93 195 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 MYOTQ9UBF9 498 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 ZFP69BQ9UJL9 534 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 STRIP2Q9ULQ0 834 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 OAZ3Q9UMX2 235 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 PLA2R1Q13018 1463 aa3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 TCOF1Q13428 1488 aaKnown RBP3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 POLR1AO95602 1720 aaPredicted RBP3.64□□□□□ -1.83
SMARCB1-208ENST00000634926 CEP170BQ9Y4F5 1589 aaPredicted RBP3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 UHRF1BP1Q6BDS2 1440 aa3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 CLTCQ00610 1675 aaKnown RBP3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 RAMP2O60895 175 aa3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 HMGB1P09429 215 aaKnown RBP3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 RAC3P60763 192 aa3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 SLC25A3Q00325 362 aa3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 SF1Q15637 639 aaKnown RBP3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 SKIDA1Q1XH10 827 aa3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 PMFBP1Q8TBY8 1022 aa3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 MRGPRX3Q96LB0 322 aa3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 ZNF703Q9H7S9 590 aaPredicted RBP3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 CYP26B1Q9NR63 512 aa3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 EFR3BQ9Y2G0 817 aa3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 GPATCH8Q9UKJ3 1502 aaKnown RBP3.63□□□□□ -1.83
SMARCB1-208ENST00000634926 CAMSAP1Q5T5Y3 1602 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 MROH1Q8NDA8 1641 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 RNF17Q9BXT8 1623 aaKnown RBP3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 CLIP1P30622 1438 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 CNTLNQ9NXG0 1405 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 KIAA1107Q9UPP5 1409 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 MBD5Q9P267 1494 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 EHBP1L1Q8N3D4 1523 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 TLDC2A0PJX2 215 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 H0Y858 1186 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 LTFP02788 710 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 SSBP05455 408 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 HSP90B1P14625 803 aaKnown RBP3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 MAKP20794 623 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 NASPP49321 788 aaPredicted RBP3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 USP10Q14694 798 aaKnown RBP3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 PRSS53Q2L4Q9 553 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 TRIM59Q8IWR1 403 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 CKAP2LQ8IYA6 745 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 CFHR4Q92496 578 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 OSBPL2Q9H1P3 480 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 NKX2-4Q9H2Z4 354 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 ZSWIM4Q9H7M6 989 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 PHAXQ9H814 394 aaKnown RBP3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 ZNF408Q9H9D4 720 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 TLR9Q9NR96 1032 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 GINM1Q9NU53 330 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 ASH2LQ9UBL3 628 aa3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 DNMT1P26358 1616 aaKnown RBP3.62□□□□□ -1.83
SMARCB1-208ENST00000634926 SUPT6HQ7KZ85 1726 aaKnown RBP3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 ARHGEF5Q12774 1597 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 PLEKHD1A6NEE1 506 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 SLC27A2O14975 620 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 CDC14BO60729 498 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 HSPA2P54652 639 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 FSTL1Q12841 308 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 NFE2L2Q16236 605 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 COLEC12Q5KU26 742 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 SPTY2D1Q68D10 685 aaPredicted RBP3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 VASNQ6EMK4 673 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 KIAA1211LQ6NV74 962 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 IFNL2Q8IZJ0 200 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 BVESQ8NE79 360 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 BTN2A2Q8WVV5 523 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 DIO2Q92813 273 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 MKL1Q969V6 931 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 PIF1Q9H611 641 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 GPRC5BQ9NZH0 403 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 TMA7Q9Y2S6 64 aaKnown RBP3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 REXO2Q9Y3B8 237 aaKnown RBP3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 TELO2Q9Y4R8 837 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 PCDHA2Q9Y5H9 948 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 DEPDC5O75140 1603 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 ZC3H13Q5T200 1668 aaKnown RBP3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 PTPRKQ15262 1439 aa3.61□□□□□ -1.83
SMARCB1-208ENST00000634926 CAMSAP2Q08AD1 1489 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 PLEKHH2Q8IVE3 1493 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 KDM5DQ9BY66 1539 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 VWDEQ8N2E2 1590 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 MAST1Q9Y2H9 1570 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 EIF2AK4Q9P2K8 1649 aaKnown RBP3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 CROCC2H7BZ55 1655 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 ANKRD34BA5PLL1 514 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 KLF4O43474 513 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 CHGBP05060 677 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 PDE6AP16499 860 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 HIBADHP31937 336 aaKnown RBP3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 MSX2P35548 267 aaPredicted RBP3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 ETFBP38117 255 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 RRADP55042 308 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 PFKPQ01813 784 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 SERINC3Q13530 473 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 BHLHA9Q7RTU4 235 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 REXO1L1PQ8IX06 675 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 FAM89AQ96GI7 184 aa3.6□□□□□ -1.83
SMARCB1-208ENST00000634926 TACO1Q9BSH4 297 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms