RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 HAS1Q92839 578 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 GUCD1Q96NT3 240 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 CDX2Q99626 313 aaPredicted RBP17.65■□□□□ 0.42
LINC00339-207ENST00000634712 CELF4Q9BZC1 486 aaKnown RBP17.65■□□□□ 0.42
LINC00339-207ENST00000634712 GINS2Q9Y248 185 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 STXBP5LQ9Y2K9 1186 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 ZBTB42B2RXF5 422 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 ZNF862O60290 1169 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 NEMFO60524 1076 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 PSMC5P62195 406 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 DEFB103AP81534 67 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 LPIN1Q14693 890 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 XKR3Q5GH77 459 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 FBXO47Q5MNV8 452 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 NCAPH2Q6IBW4 605 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 KIAA0319LQ8IZA0 1049 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 MYOCDQ8IZQ8 938 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 USP38Q8NB14 1042 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 BANK1Q8NDB2 785 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 OSBPL7Q9BZF2 842 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 SEPT9Q9UHD8 586 aaPredicted RBP17.64■□□□□ 0.41
LINC00339-207ENST00000634712 PCDHA12Q9UN75 941 aa17.64■□□□□ 0.41
LINC00339-207ENST00000634712 EML1O00423 815 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 C22orf31O95567 290 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 P4HBP07237 508 aaKnown RBP17.63■□□□□ 0.41
LINC00339-207ENST00000634712 QARSP47897 775 aaKnown RBP17.63■□□□□ 0.41
LINC00339-207ENST00000634712 TBC1D8BQ0IIM8 1120 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 GRIN2CQ14957 1233 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 EFCAB12Q6NXP0 572 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 FAM117BQ6P1L5 589 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.63■□□□□ 0.41
LINC00339-207ENST00000634712 TSHZ1Q6ZSZ6 1077 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 MAP7D2Q96T17 732 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 SUGCTQ9HAC7 445 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 VAV3Q9UKW4 847 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 NOL7Q9UMY1 257 aaKnown RBP17.63■□□□□ 0.41
LINC00339-207ENST00000634712 SQORQ9Y6N5 450 aa17.63■□□□□ 0.41
LINC00339-207ENST00000634712 CD2BP2O95400 341 aaKnown RBP17.62■□□□□ 0.41
LINC00339-207ENST00000634712 CA3P07451 260 aa17.62■□□□□ 0.41
LINC00339-207ENST00000634712 MCM7P33993 719 aa17.62■□□□□ 0.41
LINC00339-207ENST00000634712 TXKP42681 527 aa17.62■□□□□ 0.41
LINC00339-207ENST00000634712 EPHA7Q15375 998 aa17.62■□□□□ 0.41
LINC00339-207ENST00000634712 MTERF2Q49AM1 385 aa17.62■□□□□ 0.41
LINC00339-207ENST00000634712 TMCO2Q7Z6W1 182 aaPredicted RBP17.62■□□□□ 0.41
LINC00339-207ENST00000634712 NOSTRINQ8IVI9 506 aa17.62■□□□□ 0.41
LINC00339-207ENST00000634712 MYLIPQ8WY64 445 aa17.62■□□□□ 0.41
LINC00339-207ENST00000634712 RAD9AQ99638 391 aa17.62■□□□□ 0.41
LINC00339-207ENST00000634712 SMC3Q9UQE7 1217 aa17.62■□□□□ 0.41
LINC00339-207ENST00000634712 AKT3Q9Y243 479 aa17.62■□□□□ 0.41
LINC00339-207ENST00000634712 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.62■□□□□ 0.41
LINC00339-207ENST00000634712 H3BQV1 296 aa17.61■□□□□ 0.41
LINC00339-207ENST00000634712 GJB5O95377 273 aa17.61■□□□□ 0.41
LINC00339-207ENST00000634712 FOSL2P15408 326 aa17.61■□□□□ 0.41
LINC00339-207ENST00000634712 CD52P31358 61 aa17.61■□□□□ 0.41
LINC00339-207ENST00000634712 PAK2Q13177 524 aa17.61■□□□□ 0.41
LINC00339-207ENST00000634712 ODR4Q5SWX8 454 aa17.61■□□□□ 0.41
LINC00339-207ENST00000634712 GAS2L1Q99501 681 aaPredicted RBP17.61■□□□□ 0.41
LINC00339-207ENST00000634712 NIFKQ9BYG3 293 aaKnown RBP17.61■□□□□ 0.41
LINC00339-207ENST00000634712 TTC12Q9H892 705 aaPredicted RBP17.61■□□□□ 0.41
LINC00339-207ENST00000634712 EVPLQ92817 2033 aa17.61■□□□□ 0.41
LINC00339-207ENST00000634712 KDM3AQ9Y4C1 1321 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 WDR81Q562E7 1941 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 RBAK-RBAKDNI3L0D1 243 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 UPP2O95045 317 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 VTNP04004 478 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 GJB2P29033 226 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 DNM2P50570 870 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 CLCN3P51790 818 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 ZNF174Q15697 407 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 MCTP1Q6DN14 999 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 ZNF710Q8N1W2 664 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 LRRC71Q8N4P6 559 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 PPP1R16BQ96T49 567 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 FTHL17Q9BXU8 183 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 PRDM12Q9H4Q4 367 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 INSL6Q9Y581 213 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 GBF1Q92538 1859 aa17.6■□□□□ 0.41
LINC00339-207ENST00000634712 RPS6KA5O75582 802 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 TRAPPC10P48553 1259 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
LINC00339-207ENST00000634712 NFX1Q12986 1120 aaKnown RBP17.59■□□□□ 0.41
LINC00339-207ENST00000634712 ORC2Q13416 577 aaPredicted RBP17.59■□□□□ 0.41
LINC00339-207ENST00000634712 KIZQ2M2Z5 673 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 TTC38Q5R3I4 469 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 OTUD6AQ7L8S5 288 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 TPH2Q8IWU9 490 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 TOP1MTQ969P6 601 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 DYDC2Q96IM9 177 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 SCLT1Q96NL6 688 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 JPH2Q9BR39 696 aaPredicted RBP17.59■□□□□ 0.41
LINC00339-207ENST00000634712 ZSWIM4Q9H7M6 989 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 AGO3Q9H9G7 860 aaKnown RBP17.59■□□□□ 0.41
LINC00339-207ENST00000634712 PADI3Q9ULW8 664 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 MYO9BQ13459 2157 aa17.59■□□□□ 0.41
LINC00339-207ENST00000634712 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.58■□□□□ 0.4
LINC00339-207ENST00000634712 TMEM150BA6NC51 233 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 WNT7AO00755 349 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 ENPP3O14638 875 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 U2AF2P26368 475 aaKnown RBP eCLIP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms