RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 DACH1Q9UI36 760 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 A0A1W2PQU0 124 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 LACTBL1A8MY62 500 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 OPA1O60313 960 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 SRGAP2O75044 1071 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 OFD1O75665 1012 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 SASH1O94885 1247 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 C6orf222P0C671 652 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-213ENST00000630925 ZBTB48P10074 688 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-213ENST00000630925 TFEBP19484 476 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 MC4RP32245 332 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 HOXD13P35453 343 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 RBM5P52756 815 aaKnown RBP eCLIP5.41□□□□□ -1.54
SDCBP-213ENST00000630925 SP140Q13342 867 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 MPP2Q14168 576 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 KRT32Q14532 448 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 CWF19L2Q2TBE0 894 aaKnown RBP5.41□□□□□ -1.54
SDCBP-213ENST00000630925 ARL13BQ3SXY8 428 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 IZUMO3Q5VZ72 239 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 FAM117BQ6P1L5 589 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 LRRTM4Q86VH4 590 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 NLRP10Q86W26 655 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 SIAH1Q8IUQ4 282 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-213ENST00000630925 OR52K2Q8NGK3 314 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 GATAD2BQ8WXI9 593 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 RTF1Q92541 710 aaKnown RBP5.41□□□□□ -1.54
SDCBP-213ENST00000630925 RABGGTAQ92696 567 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 HPS3Q969F9 1004 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 COG8Q96MW5 612 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 DNAI2Q9GZS0 605 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 SIL1Q9H173 461 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 SLC52A2Q9HAB3 445 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 EXOC1Q9NV70 894 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 MCM9Q9NXL9 1143 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 KLK14Q9P0G3 267 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 SERTAD1Q9UHV2 236 aa5.41□□□□□ -1.54
SDCBP-213ENST00000630925 RTCBQ9Y3I0 505 aaKnown RBP5.41□□□□□ -1.54
SDCBP-213ENST00000630925 EFCAB5A4FU69 1503 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 BRD4O60885 1362 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 A8MVJ9 347 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 KIF2AO00139 706 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 GNRH1P01148 92 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 RPLP1P05386 114 aaKnown RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 CLTBP09497 229 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 CCDC172P0C7W6 258 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 TSPY4P0CV99 314 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 TSPY10P0CW01 314 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 PCP11498 1178 aaKnown RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 ALAS2P22557 587 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 AKAP5P24588 427 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 ATP5DP30049 168 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 ALDH3A2P51648 485 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 CASP5P51878 434 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 PSMA6P60900 246 aaKnown RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 KLHL30Q0D2K2 578 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 GALNT1Q10472 559 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 NCAPHQ15003 741 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 PREPLQ4J6C6 727 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 GPR139Q6DWJ6 353 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 VHLLQ6RSH7 139 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 REC114Q7Z4M0 266 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 TREML1Q86YW5 311 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 SCUBE1Q8IWY4 988 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 CCDC170Q8IYT3 715 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 NUP93Q8N1F7 819 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 PPM1NQ8N819 430 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 GSTCDQ8NEC7 633 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 PPP1R35Q8TAP8 253 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 SLC16A10Q8TF71 515 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 TRIM11Q96F44 468 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 AHCYL2Q96HN2 611 aaKnown RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 SCLYQ96I15 445 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 ZNF845Q96IR2 970 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 FSD1Q9BTV5 496 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 TTPALQ9BTX7 342 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 LIN28AQ9H9Z2 209 aaKnown RBP5.4□□□□□ -1.54
SDCBP-213ENST00000630925 TRPV5Q9NQA5 729 aa5.4□□□□□ -1.54
SDCBP-213ENST00000630925 LRRC7Q96NW7 1537 aa5.4□□□□□ -1.55
SDCBP-213ENST00000630925 PLA2R1Q13018 1463 aa5.4□□□□□ -1.55
SDCBP-213ENST00000630925 ZNF891A8MT65 544 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 H0YC42 278 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 PAHP00439 452 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 PLATP00750 562 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 MYCP01106 439 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 INHAP05111 366 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 CFHP08603 1231 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 HNRNPLP14866 589 aaKnown RBP eCLIP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 ALOX12P18054 663 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 WNT7BP56706 349 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 TGFB2P61812 414 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 PPARDQ03181 441 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 GBE1Q04446 702 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 LAPTM5Q13571 262 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 KCNB1Q14721 858 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 PLCL1Q15111 1095 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 TEAD4Q15561 434 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 ZMYM1Q5SVZ6 1142 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 PGM2L1Q6PCE3 622 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms