RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 MB21D2Q8IYB1 491 aaPredicted RBP23.02■■□□□ 1.28
TARDBP-228ENST00000629725 CMTR1Q8N1G2 835 aaKnown RBP23.02■■□□□ 1.28
TARDBP-228ENST00000629725 COLGALT1Q8NBJ5 622 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 ADAM2Q99965 735 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 SDF4Q9BRK5 362 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 S1PR5Q9H228 398 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 ERVK-5Q9HDB9 667 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 RGS18Q9NS28 235 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 C1orf112Q9NSG2 853 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 TYW1Q9NV66 732 aaKnown RBP23.02■■□□□ 1.28
TARDBP-228ENST00000629725 EVPLQ92817 2033 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 FSCN2O14926 492 aa23.01■■□□□ 1.27
TARDBP-228ENST00000629725 TECP42680 631 aa23.01■■□□□ 1.27
TARDBP-228ENST00000629725 KCNC3Q14003 757 aa23.01■■□□□ 1.27
TARDBP-228ENST00000629725 ODR4Q5SWX8 454 aa23.01■■□□□ 1.27
TARDBP-228ENST00000629725 SLC24A5Q71RS6 500 aa23.01■■□□□ 1.27
TARDBP-228ENST00000629725 NOC2LQ9Y3T9 749 aaKnown RBP23.01■■□□□ 1.27
TARDBP-228ENST00000629725 NFASCO94856 1347 aa23.01■■□□□ 1.27
TARDBP-228ENST00000629725 H0Y858 1186 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 KLRC1P26715 233 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 SLC26A2P50443 739 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 NUBP1P53384 320 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 PLPP4Q5VZY2 271 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 ANKRD54Q6NXT1 300 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 CASC1Q6TDU7 716 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 RASGRP4Q8TDF6 673 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 RIPOR3Q96MK2 946 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 MXRA8Q9BRK3 442 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 HCSTQ9UBK5 93 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 LZTS1Q9Y250 596 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 PLXNA3P51805 1871 aa23■■□□□ 1.27
TARDBP-228ENST00000629725 SPTBN4Q9H254 2564 aa22.99■■□□□ 1.27
TARDBP-228ENST00000629725 GPR182O15218 404 aa22.99■■□□□ 1.27
TARDBP-228ENST00000629725 GSPT1P15170 499 aaKnown RBP22.99■■□□□ 1.27
TARDBP-228ENST00000629725 SP100P23497 879 aaPredicted RBP22.99■■□□□ 1.27
TARDBP-228ENST00000629725 NFXL1Q6ZNB6 911 aa22.99■■□□□ 1.27
TARDBP-228ENST00000629725 CYP2W1Q8TAV3 490 aa22.99■■□□□ 1.27
TARDBP-228ENST00000629725 TMEM40Q8WWA1 233 aa22.99■■□□□ 1.27
TARDBP-228ENST00000629725 APOL5Q9BWW9 433 aa22.99■■□□□ 1.27
TARDBP-228ENST00000629725 CDHR5Q9HBB8 845 aa22.99■■□□□ 1.27
TARDBP-228ENST00000629725 PUF60Q9UHX1 559 aaKnown RBP22.99■■□□□ 1.27
TARDBP-228ENST00000629725 ST3GAL5Q9UNP4 418 aa22.99■■□□□ 1.27
TARDBP-228ENST00000629725 MYO10Q9HD67 2058 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 hCG_1642624A0A1W2PR95 340 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 CCDC69A6NI79 296 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 C9IYK1 514 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 PDGFBP01127 241 aaPredicted RBP22.98■■□□□ 1.27
TARDBP-228ENST00000629725 LAG3P18627 525 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 APOBRQ0VD83 1088 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 LLGL2Q6P1M3 1020 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 SYCE2Q6PIF2 218 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 TMTC2Q8N394 836 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 MRPS27Q92552 414 aaKnown RBP22.98■■□□□ 1.27
TARDBP-228ENST00000629725 TCF25Q9BQ70 676 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 MTA3Q9BTC8 594 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 CWH43Q9H720 699 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 ATP6V0A4Q9HBG4 840 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 ENTPD7Q9NQZ7 604 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 NR2E1Q9Y466 385 aa22.98■■□□□ 1.27
TARDBP-228ENST00000629725 DCHS1Q96JQ0 3298 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 HBP1O60381 514 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 ATG7O95352 703 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 ARP10275 920 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 FGFR1P11362 822 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 HOXB8P17481 243 aaPredicted RBP22.97■■□□□ 1.27
TARDBP-228ENST00000629725 RXRAP19793 462 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 CHMLP26374 656 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 PLCB3Q01970 1234 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 TTC22Q5TAA0 569 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 KIAA0319LQ8IZA0 1049 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 CCDC82Q8N4S0 544 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 NGRNQ9NPE2 291 aaKnown RBP22.97■■□□□ 1.27
TARDBP-228ENST00000629725 TSHZ2Q9NRE2 1034 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 TMEM161AQ9NX61 479 aa22.97■■□□□ 1.27
TARDBP-228ENST00000629725 GALR2O43603 387 aaPredicted RBP22.96■■□□□ 1.27
TARDBP-228ENST00000629725 PRC1O43663 620 aa22.96■■□□□ 1.27
TARDBP-228ENST00000629725 CALM1P0DP23 149 aa22.96■■□□□ 1.27
TARDBP-228ENST00000629725 CALM2P0DP24 149 aa22.96■■□□□ 1.27
TARDBP-228ENST00000629725 CALM3P0DP25 149 aa22.96■■□□□ 1.27
TARDBP-228ENST00000629725 PDE4AP27815 886 aa22.96■■□□□ 1.27
TARDBP-228ENST00000629725 ITGB3BPQ13352 177 aaPredicted RBP22.96■■□□□ 1.27
TARDBP-228ENST00000629725 HEATR3Q7Z4Q2 680 aa22.96■■□□□ 1.27
TARDBP-228ENST00000629725 KREMEN2Q8NCW0 462 aa22.96■■□□□ 1.27
TARDBP-228ENST00000629725 ELAC1Q9H777 363 aaKnown RBP22.96■■□□□ 1.27
TARDBP-228ENST00000629725 AGO4Q9HCK5 861 aaKnown RBP22.96■■□□□ 1.27
TARDBP-228ENST00000629725 PTPRZ1P23471 2315 aaPredicted RBP22.96■■□□□ 1.27
TARDBP-228ENST00000629725 IGKV6D-21A0A0A0MT36 114 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 HIDE1A8MVS5 230 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 PROB1E7EW31 1015 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 BACH1O14867 736 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 COL1A2P08123 1366 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 FOXK2Q01167 660 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 MTMR3Q13615 1198 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 CEP55Q53EZ4 464 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 UBALD2Q8IYN6 164 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 MAP4K1Q92918 833 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 SORCS3Q9UPU3 1222 aa22.95■■□□□ 1.26
TARDBP-228ENST00000629725 MCM5P33992 734 aa22.94■■□□□ 1.26
TARDBP-228ENST00000629725 CRYBB1P53674 252 aaPredicted RBP22.94■■□□□ 1.26
TARDBP-228ENST00000629725 FAM189BP81408 668 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms