RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 GMCL1P1Q8NEA9 526 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 FAM122AQ96E09 287 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 FRMD6Q96NE9 622 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 ZKSCAN3Q9BRR0 538 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 KATNBL1Q9H079 304 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 UPF3AQ9H1J1 476 aaKnown RBP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 VAT1LQ9HCJ6 419 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 ADD3Q9UEY8 706 aaKnown RBP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 C5orf42Q9H799 3197 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 IGKV6D-41A0A0C4DH26 115 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 SUPT20HL2P0C7V6 817 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 TXNP10599 105 aaKnown RBP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 ACTN1P12814 892 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 HSPA4P34932 840 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 KCNJ6P48051 423 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 TLR1Q15399 786 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 AKNAD1Q5T1N1 836 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 IQSEC1Q6DN90 963 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 TAPT1Q6NXT6 567 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 MKL1Q969V6 931 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 TMX3Q96JJ7 454 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 FOXD3Q9UJU5 478 aaPredicted RBP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 HCN4Q9Y3Q4 1203 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 TTC41PQ6P2S7 1318 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 RAD50Q92878 1312 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 GOLGA6L22H0YM25 854 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 SGSM2O43147 1006 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 ST13P50502 369 aaKnown RBP5.56□□□□□ -1.52
LINC00550-201ENST00000629293 CENPCQ03188 943 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.56□□□□□ -1.52
LINC00550-201ENST00000629293 SYDE2Q5VT97 1194 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 RNF207Q6ZRF8 634 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 TREML1Q86YW5 311 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 INTS4Q96HW7 963 aaKnown RBP5.56□□□□□ -1.52
LINC00550-201ENST00000629293 ALG1Q9BT22 464 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 PHACTR1Q9C0D0 580 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 UBA5Q9GZZ9 404 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 IL17RBQ9NRM6 502 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 LMBRD1Q9NUN5 540 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 EPOPA6NHQ4 379 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 ARHGEF15O94989 841 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 RPIAP49247 311 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 CPT1AP50416 773 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 ALDH5A1P51649 535 aaPredicted RBP5.56□□□□□ -1.52
LINC00550-201ENST00000629293 RPS6P62753 249 aaKnown RBP5.56□□□□□ -1.52
LINC00550-201ENST00000629293 AAK1Q2M2I8 961 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 DUSP28Q4G0W2 176 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 RASIP1Q5U651 963 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 GLIS3Q8NEA6 775 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 GDPD5Q8WTR4 605 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 RILPL2Q969X0 211 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 GMCL1Q96IK5 515 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 CHRDQ9H2X0 955 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 VTA1Q9NP79 307 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 ROBO3Q96MS0 1386 aa5.56□□□□□ -1.52
LINC00550-201ENST00000629293 ICAM1P05362 532 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 IBSPP21815 317 aaPredicted RBP5.55□□□□□ -1.52
LINC00550-201ENST00000629293 NEK4P51957 841 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 ZNF445P59923 1031 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 PURAQ00577 322 aaKnown RBP5.55□□□□□ -1.52
LINC00550-201ENST00000629293 NR5A1Q13285 461 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 DHX37Q8IY37 1157 aaKnown RBP5.55□□□□□ -1.52
LINC00550-201ENST00000629293 AFG1LQ8WV93 481 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 MTG1Q9BT17 334 aaPredicted RBP5.55□□□□□ -1.52
LINC00550-201ENST00000629293 LSG1Q9H089 658 aaKnown RBP5.55□□□□□ -1.52
LINC00550-201ENST00000629293 EPHX3Q9H6B9 360 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 RRAGDQ9NQL2 400 aaPredicted RBP5.55□□□□□ -1.52
LINC00550-201ENST00000629293 PCDHA11Q9Y5I1 949 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 V9GY48 417 aaPredicted RBP5.55□□□□□ -1.52
LINC00550-201ENST00000629293 ZNF236Q9UL36 1845 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 BAZ2BQ9UIF8 2168 aaKnown RBP5.55□□□□□ -1.52
LINC00550-201ENST00000629293 LCHNA4D1U4 455 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 TNFRSF21O75509 655 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 PTGISQ16647 500 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 TKFCQ3LXA3 575 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 ZMYM1Q5SVZ6 1142 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 FAM227BQ96M60 508 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 TMEM47Q9BQJ4 181 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 INPP5FQ9Y2H2 1132 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 KCNMB2Q9Y691 235 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 FAM186AA6NE01 2351 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 A0A0G2JMZ2 1700 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 UPP2O95045 317 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 ADH1AP07327 375 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 KCNA5P22460 613 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 ARID5AQ03989 594 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 LY6KQ17RY6 165 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 LIAT1Q6ZQX7 453 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 HERC6Q8IVU3 1022 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 MYOCDQ8IZQ8 938 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 SCFD2Q8WU76 684 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 TBC1D5Q92609 795 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 MPHOSPH6Q99547 160 aaKnown RBP5.55□□□□□ -1.52
LINC00550-201ENST00000629293 OSBPL2Q9H1P3 480 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 MTCH2Q9Y6C9 303 aa5.55□□□□□ -1.52
LINC00550-201ENST00000629293 TRIP12Q14669 1992 aaPredicted RBP5.54□□□□□ -1.52
LINC00550-201ENST00000629293 IQCF3P0C7M6 154 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 TOP1P11387 765 aaKnown RBP5.54□□□□□ -1.52
LINC00550-201ENST00000629293 BMP1P13497 986 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 240.3 ms