RNA–Protein interactions for RNA: ENST00000628375.2

CHD2-215, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 3,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-215ENST00000628375 ADALQ6DHV7 355 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 TLK2Q86UE8 772 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 C7orf61Q8IZ16 206 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 LRRC71Q8N4P6 559 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 CNNM3Q8NE01 707 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 ANKRD20A12PQ8NF67 263 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 MRPS27Q92552 414 aaKnown RBP6.88□□□□□ -1.31
CHD2-215ENST00000628375 SCLYQ96I15 445 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 CCDC43Q96MW1 224 aaKnown RBP6.88□□□□□ -1.31
CHD2-215ENST00000628375 ZNF396Q96N95 335 aaPredicted RBP6.88□□□□□ -1.31
CHD2-215ENST00000628375 TACO1Q9BSH4 297 aaKnown RBP6.88□□□□□ -1.31
CHD2-215ENST00000628375 CERS4Q9HA82 394 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 PXMP2Q9NR77 195 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 TRMT13Q9NUP7 481 aaKnown RBP6.88□□□□□ -1.31
CHD2-215ENST00000628375 SLC5A4Q9NY91 659 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 ADD3Q9UEY8 706 aaKnown RBP6.88□□□□□ -1.31
CHD2-215ENST00000628375 SUFUQ9UMX1 484 aa6.88□□□□□ -1.31
CHD2-215ENST00000628375 SPTBN2O15020 2390 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 SPEGQ15772 3267 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 CUTAO60888 179 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 SLC25A27O95847 323 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 SNHG28P0DPA3 235 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 FGFR4P22455 802 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 KRT2P35908 639 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 TBX2Q13207 712 aaPredicted RBP6.87□□□□□ -1.31
CHD2-215ENST00000628375 ARHGEF6Q15052 776 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 PGM5Q15124 567 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 PLA2G4FQ68DD2 849 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 EP400NLQ6ZTU2 488 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 REPS2Q8NFH8 660 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 KAT2BQ92831 832 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 HHIPL1Q96JK4 782 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 C12orf42Q96LP6 360 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 PNKPQ96T60 521 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.87□□□□□ -1.312e-6■■■■■ 55.9
CHD2-215ENST00000628375 MCM3APO60318 1980 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 PRPF3O43395 683 aaKnown RBP6.87□□□□□ -1.31
CHD2-215ENST00000628375 STX10O60499 249 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 AARSP49588 968 aaKnown RBP eCLIP6.87□□□□□ -1.31
CHD2-215ENST00000628375 PTGDRQ13258 359 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 MB21D1Q8N884 522 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 DDX25Q9UHL0 483 aaKnown RBP6.87□□□□□ -1.31
CHD2-215ENST00000628375 PCDHA7Q9UN72 937 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 CHD9Q3L8U1 2897 aa6.87□□□□□ -1.31
CHD2-215ENST00000628375 ZBBXA8MT70 800 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 IPO5O00410 1097 aaKnown RBP6.86□□□□□ -1.31
CHD2-215ENST00000628375 STRNO43815 780 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 GAS7O60861 476 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 RGS20O76081 388 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 HARSP12081 509 aaKnown RBP6.86□□□□□ -1.31
CHD2-215ENST00000628375 NDUFA8P51970 172 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 TUBB2AQ13885 445 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 CASP8Q14790 479 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 NONOQ15233 471 aaKnown RBP eCLIP6.86□□□□□ -1.318e-6■□□□□ 8.2
CHD2-215ENST00000628375 MTERF2Q49AM1 385 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 FBXO46Q6PJ61 603 aaPredicted RBP6.86□□□□□ -1.31
CHD2-215ENST00000628375 OTOP2Q7RTS6 562 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 MCF2L2Q86YR7 1114 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 KSR1Q8IVT5 923 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 CEP112Q8N8E3 955 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 SDF4Q9BRK5 362 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 TUBB2BQ9BVA1 445 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.86□□□□□ -1.311e-7■■□□□ 12.5
CHD2-215ENST00000628375 VIPAS39Q9H9C1 493 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 SPC25Q9HBM1 224 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 ABCB6Q9NP58 842 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 FAM237AA0A1B0GTK4 181 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 SHOX2O60902 331 aaPredicted RBP6.86□□□□□ -1.31
CHD2-215ENST00000628375 ERLIN2O94905 339 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 HMGCRP04035 888 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 TUBBP07437 444 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 ATP1A3P13637 1013 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 UBASH3AP57075 661 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 MKRN4PQ13434 485 aaPredicted RBP6.86□□□□□ -1.31
CHD2-215ENST00000628375 STK38Q15208 465 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 SH3RF1Q7Z6J0 888 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 ELOA2Q8IYF1 753 aaPredicted RBP6.86□□□□□ -1.31
CHD2-215ENST00000628375 CEP120Q8N960 986 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 APBA2Q99767 749 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 BAG1Q99933 345 aaPredicted RBP6.86□□□□□ -1.31
CHD2-215ENST00000628375 SPZ1Q9BXG8 430 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 RNPEPQ9H4A4 650 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 FAM204AQ9H8W3 233 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 MAPK8IP1Q9UQF2 711 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 SIPA1L1O43166 1804 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 ANKRD65E5RJM6 399 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 PRPF6O94906 941 aaKnown RBP6.86□□□□□ -1.31
CHD2-215ENST00000628375 SRGAP2CP0DJJ0 459 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 HNRNPH1P31943 449 aaKnown RBP6.86□□□□□ -1.31
CHD2-215ENST00000628375 AFMP43652 599 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 SATB1Q01826 763 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 TBC1D8BQ0IIM8 1120 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 HSP90B2PQ58FF3 399 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 HSP90AA4PQ58FG1 418 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 LRCH2Q5VUJ6 765 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 PDXDC2PQ6P474 469 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 KCNV1Q6PIU1 500 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 TOGARAM2Q6ZUX3 1019 aa6.86□□□□□ -1.31
CHD2-215ENST00000628375 DYMQ7RTS9 669 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms