RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 BAP1Q92560 729 aa24.27■■□□□ 1.48
PNKP-220ENST00000627232 BCAS3Q9H6U6 928 aa24.27■■□□□ 1.48
PNKP-220ENST00000627232 CYP39A1Q9NYL5 469 aa24.27■■□□□ 1.48
PNKP-220ENST00000627232 CSADQ9Y600 493 aa24.27■■□□□ 1.48
PNKP-220ENST00000627232 A0A0U1RQJ8 604 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 ATP9AO75110 1047 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 HIP1RO75146 1068 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 RARRES1P49788 294 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 PRKG1Q13976 671 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 ODR4Q5SWX8 454 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 CHST13Q8NET6 341 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 ATRIPQ8WXE1 791 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 SYN2Q92777 582 aaPredicted RBP24.26■■□□□ 1.47
PNKP-220ENST00000627232 PURBQ96QR8 312 aaKnown RBP24.26■■□□□ 1.47
PNKP-220ENST00000627232 STRA6Q9BX79 667 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 POLD4Q9HCU8 107 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 ANKEF1Q9NU02 776 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 LCTP09848 1927 aa24.26■■□□□ 1.47
PNKP-220ENST00000627232 IPO7O95373 1038 aaKnown RBP24.25■■□□□ 1.47
PNKP-220ENST00000627232 HERVK_113P62684 666 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 KCNH2Q12809 1159 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 TUBB2AQ13885 445 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 CACNA2D4Q7Z3S7 1137 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 DAW1Q8N136 415 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 GOLGA5Q8TBA6 731 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 CDHR1Q96JP9 859 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 MKNK1Q9BUB5 465 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 TUBB2BQ9BVA1 445 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 A1CFQ9NQ94 594 aaKnown RBP24.25■■□□□ 1.47
PNKP-220ENST00000627232 NFASCO94856 1347 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 PPP1R37O75864 691 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 AFPP02771 609 aaKnown RBP24.25■■□□□ 1.47
PNKP-220ENST00000627232 ERCC3P19447 782 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 YWHABP31946 246 aaKnown RBP24.25■■□□□ 1.47
PNKP-220ENST00000627232 IREB2P48200 963 aaKnown RBP24.25■■□□□ 1.47
PNKP-220ENST00000627232 ZNF569Q5MCW4 686 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 CCDC155Q8N6L0 562 aa24.25■■□□□ 1.47
PNKP-220ENST00000627232 LSM14BQ9BX40 385 aaKnown RBP24.25■■□□□ 1.47
PNKP-220ENST00000627232 IRX2Q9BZI1 471 aaPredicted RBP24.25■■□□□ 1.47
PNKP-220ENST00000627232 LARSQ9P2J5 1176 aaKnown RBP24.25■■□□□ 1.47
PNKP-220ENST00000627232 LRRC53A6NM62 1247 aa24.24■■□□□ 1.47
PNKP-220ENST00000627232 ADM5C9JUS6 153 aa24.24■■□□□ 1.47
PNKP-220ENST00000627232 AKAP3O75969 853 aa24.24■■□□□ 1.47
PNKP-220ENST00000627232 NOL4O94818 638 aa24.24■■□□□ 1.47
PNKP-220ENST00000627232 CCNE2O96020 404 aa24.24■■□□□ 1.47
PNKP-220ENST00000627232 XRCC5P13010 732 aaKnown RBP24.24■■□□□ 1.47
PNKP-220ENST00000627232 KCNA1Q09470 495 aa24.24■■□□□ 1.47
PNKP-220ENST00000627232 RRAGAQ7L523 313 aa24.24■■□□□ 1.47
PNKP-220ENST00000627232 HS2ST1Q7LGA3 356 aa24.24■■□□□ 1.47
PNKP-220ENST00000627232 CCDC42Q96M95 316 aa24.24■■□□□ 1.47
PNKP-220ENST00000627232 MOV10L1Q9BXT6 1211 aaKnown RBP24.24■■□□□ 1.47
PNKP-220ENST00000627232 MRFAP1Q9Y605 127 aa24.24■■□□□ 1.47
PNKP-220ENST00000627232 DKC1O60832 514 aaKnown RBP eCLIP24.23■■□□□ 1.47
PNKP-220ENST00000627232 LCA5LO95447 670 aa24.23■■□□□ 1.47
PNKP-220ENST00000627232 MYBPC2Q14324 1141 aa24.23■■□□□ 1.47
PNKP-220ENST00000627232 PLS1Q14651 629 aa24.23■■□□□ 1.47
PNKP-220ENST00000627232 ZC2HC1CQ53FD0 456 aaPredicted RBP24.23■■□□□ 1.47
PNKP-220ENST00000627232 SMAP1Q8IYB5 467 aaPredicted RBP24.23■■□□□ 1.47
PNKP-220ENST00000627232 IWS1Q96ST2 819 aa24.23■■□□□ 1.47
PNKP-220ENST00000627232 SYT17Q9BSW7 474 aa24.23■■□□□ 1.47
PNKP-220ENST00000627232 PLCB1Q9NQ66 1216 aa24.23■■□□□ 1.47
PNKP-220ENST00000627232 ARHGAP20Q9P2F6 1191 aa24.23■■□□□ 1.47
PNKP-220ENST00000627232 CLIC2O15247 247 aa24.22■■□□□ 1.47
PNKP-220ENST00000627232 PSMC2P35998 433 aaKnown RBP24.22■■□□□ 1.47
PNKP-220ENST00000627232 PPATQ06203 517 aa24.22■■□□□ 1.47
PNKP-220ENST00000627232 MAPK8IP2Q13387 824 aaPredicted RBP24.22■■□□□ 1.47
PNKP-220ENST00000627232 LBX2Q6XYB7 198 aa24.22■■□□□ 1.47
PNKP-220ENST00000627232 KIAA1328Q86T90 577 aa24.22■■□□□ 1.47
PNKP-220ENST00000627232 SLC35F6Q8N357 371 aa24.22■■□□□ 1.47
PNKP-220ENST00000627232 PROCA1Q8NCQ7 364 aaPredicted RBP24.22■■□□□ 1.47
PNKP-220ENST00000627232 DNERQ8NFT8 737 aa24.22■■□□□ 1.47
PNKP-220ENST00000627232 CCDC43Q96MW1 224 aaKnown RBP24.22■■□□□ 1.47
PNKP-220ENST00000627232 GBP3Q9H0R5 595 aa24.22■■□□□ 1.47
PNKP-220ENST00000627232 DMAC2Q9NW81 257 aa24.22■■□□□ 1.47
PNKP-220ENST00000627232 FBXO40Q9UH90 709 aa24.22■■□□□ 1.47
PNKP-220ENST00000627232 PCDHA10Q9Y5I2 948 aa24.22■■□□□ 1.47
PNKP-220ENST00000627232 GOLGB1Q14789 3259 aaKnown RBP24.21■■□□□ 1.47
PNKP-220ENST00000627232 SSU72P8A0A1W2PR75 194 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 KRT86O43790 486 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 PLS3P13797 630 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 KCNA2P16389 499 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 SPA17Q15506 151 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 UGCGQ16739 394 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 GNPTABQ3T906 1256 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 C9orf131Q5VYM1 1079 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 USP50Q70EL3 339 aaPredicted RBP24.21■■□□□ 1.47
PNKP-220ENST00000627232 RIOX2Q8IUF8 465 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 SLC9A9Q8IVB4 645 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 EHBP1Q8NDI1 1231 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 SLC17A8Q8NDX2 589 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 MNS1Q8NEH6 495 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 BORCS6Q96GS4 357 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 DRC1Q96MC2 740 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 GANQ9H2C0 597 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 ST6GALNAC4Q9H4F1 302 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 CGNQ9P2M7 1197 aaKnown RBP24.21■■□□□ 1.47
PNKP-220ENST00000627232 ARID2Q68CP9 1835 aa24.21■■□□□ 1.47
PNKP-220ENST00000627232 GTPBP10A4D1E9 387 aaKnown RBP24.2■■□□□ 1.47
PNKP-220ENST00000627232 CTAGE9A4FU28 777 aa24.2■■□□□ 1.47
PNKP-220ENST00000627232 RRP9O43818 475 aaKnown RBP24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms