RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 MICAL1Q8TDZ2 1067 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 JPH1Q9HDC5 661 aaPredicted RBP12.14□□□□□ -0.47
TCF4-253ENST00000626466 TLR9Q9NR96 1032 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 RNF19AQ9NV58 838 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 GINS2Q9Y248 185 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 SQORQ9Y6N5 450 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 PLXNA3P51805 1871 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 KDM3AQ9Y4C1 1321 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 HIDE1A8MVS5 230 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 C9IYK1 514 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 STK25O00506 426 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 ATF7P17544 494 aaPredicted RBP12.13□□□□□ -0.47
TCF4-253ENST00000626466 ACTR2P61160 394 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 KRT76Q01546 638 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 ITGB3BPQ13352 177 aaPredicted RBP12.13□□□□□ -0.47
TCF4-253ENST00000626466 SPOUT1Q5T280 376 aaKnown RBP12.13□□□□□ -0.47
TCF4-253ENST00000626466 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 MTHFD1LQ6UB35 978 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 ASCL5Q7RTU5 278 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 NCOA7Q8NI08 942 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 CTCFLQ8NI51 663 aaPredicted RBP12.13□□□□□ -0.47
TCF4-253ENST00000626466 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 ADAM2Q99965 735 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 FTHL17Q9BXU8 183 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 RWDD1Q9H446 243 aaPredicted RBP12.13□□□□□ -0.47
TCF4-253ENST00000626466 CWH43Q9H720 699 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 PSTPIP2Q9H939 334 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 TYW1Q9NV66 732 aaKnown RBP12.13□□□□□ -0.47
TCF4-253ENST00000626466 SLC9A2Q9UBY0 812 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 LRFN2Q9ULH4 789 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
TCF4-253ENST00000626466 SMIM35A0A1B0GVV1 85 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 ZBTB42B2RXF5 422 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 M0QZ92 97 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 DDAH1O94760 285 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 CCNE2O96020 404 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 CHMLP26374 656 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 TECP42680 631 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 TTC22Q5TAA0 569 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 ANKRD54Q6NXT1 300 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 LRRC55Q6ZSA7 311 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 CCDC82Q8N4S0 544 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 EXOC6Q8TAG9 804 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 NEK1Q96PY6 1258 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 KCNH7Q9NS40 1196 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 TMEM260Q9NX78 707 aa12.12□□□□□ -0.47
TCF4-253ENST00000626466 SEC63Q9UGP8 760 aaKnown RBP12.12□□□□□ -0.47
TCF4-253ENST00000626466 TRIOO75962 3097 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 DDX39AO00148 427 aaKnown RBP12.11□□□□□ -0.47
TCF4-253ENST00000626466 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
TCF4-253ENST00000626466 PRC1O43663 620 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 BRD1O95696 1058 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 WEE2P0C1S8 567 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 KLRC1P26715 233 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 STAT5BP51692 787 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 UBE3AQ05086 875 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 DSC3Q14574 896 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 SART3Q15020 963 aaKnown RBP12.11□□□□□ -0.47
TCF4-253ENST00000626466 PKN1Q16512 942 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 KANK3Q6NY19 840 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 FAM228AQ86W67 206 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 CCDC60Q8IWA6 550 aaPredicted RBP12.11□□□□□ -0.47
TCF4-253ENST00000626466 KIAA0319LQ8IZA0 1049 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 TMEM105Q8N8V8 129 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 ATOH1Q92858 354 aaPredicted RBP12.11□□□□□ -0.47
TCF4-253ENST00000626466 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 PRRX2Q99811 253 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 MXRA8Q9BRK3 442 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 AZI2Q9H6S1 392 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 AGO4Q9HCK5 861 aaKnown RBP12.11□□□□□ -0.47
TCF4-253ENST00000626466 RGS18Q9NS28 235 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 ST3GAL5Q9UNP4 418 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 PCDHB7Q9Y5E2 793 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 PCDHB12Q9Y5F1 795 aa12.11□□□□□ -0.47
TCF4-253ENST00000626466 FNDC1Q4ZHG4 1894 aaPredicted RBP12.1□□□□□ -0.47
TCF4-253ENST00000626466 LOXHD1Q8IVV2 1947 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 DENND3A2RUS2 1198 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 C2CD4DB7Z1M9 353 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 ADAMTS3O15072 1205 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 SGSM2O43147 1006 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 RPS6KA5O75582 802 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
TCF4-253ENST00000626466 ATP4AP20648 1035 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 KIF5BP33176 963 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 KIZQ2M2Z5 673 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 WWC2Q6AWC2 1192 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 TMEM184AQ6ZMB5 413 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 PLPPR4Q7Z2D5 763 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 HEATR3Q7Z4Q2 680 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 KREMEN2Q8NCW0 462 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 MRPS27Q92552 414 aaKnown RBP12.1□□□□□ -0.47
TCF4-253ENST00000626466 RIPOR3Q96MK2 946 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 CDCA3Q99618 268 aaPredicted RBP12.1□□□□□ -0.47
TCF4-253ENST00000626466 OSMRQ99650 979 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 TCF25Q9BQ70 676 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 LRRC2Q9BYS8 371 aa12.1□□□□□ -0.47
TCF4-253ENST00000626466 POMKQ9H5K3 350 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms