RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 SHCBP1Q8NEM2 672 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 ZNF512Q96ME7 567 aaPredicted RBP11.94□□□□□ -0.5
VPS8-227ENST00000625842 TRPC7Q9HCX4 862 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 KANSL3Q9P2N6 904 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 FAM95CA0A1B0GW59 222 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 EFCAB14O75071 495 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 PPFIA2O75334 1257 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 NR2F2P24468 414 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 PRMT2P55345 433 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 LAMB3Q13751 1172 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 KCNB1Q14721 858 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 RRAGAQ7L523 313 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 MRPL9Q9BYD2 267 aaKnown RBP11.94□□□□□ -0.5
VPS8-227ENST00000625842 JPH1Q9HDC5 661 aaPredicted RBP11.94□□□□□ -0.5
VPS8-227ENST00000625842 PNMA6EA0A0J9YXQ4 647 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 PRPF3O43395 683 aaKnown RBP11.94□□□□□ -0.5
VPS8-227ENST00000625842 ZNF202O95125 648 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 GGPS1O95749 300 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 FKBP3Q00688 224 aaKnown RBP11.94□□□□□ -0.5
VPS8-227ENST00000625842 TMEM35BQ8NCS4 154 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 UBLCP1Q8WVY7 318 aaPredicted RBP11.94□□□□□ -0.5
VPS8-227ENST00000625842 TLK1Q9UKI8 766 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 MAGED2Q9UNF1 606 aaPredicted RBP11.94□□□□□ -0.5
VPS8-227ENST00000625842 MROH7Q68CQ1 1323 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 SSH2Q76I76 1423 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 NCAM2O15394 837 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 TBC1D8O95759 1140 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 RFC5P40937 340 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 STX1BP61266 288 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 CDK17Q00537 523 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 ZNF699Q32M78 642 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 ITIH5Q86UX2 942 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 CELF1Q92879 486 aaKnown RBP11.94□□□□□ -0.5
VPS8-227ENST00000625842 VPS50Q96JG6 964 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 C16orf45Q96MC5 204 aaPredicted RBP11.94□□□□□ -0.5
VPS8-227ENST00000625842 ZNF148Q9UQR1 794 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 ASMTLO95671 621 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 BRD1O95696 1058 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 LIFRP42702 1097 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 PDE1BQ01064 536 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 PDXDC1Q6P996 788 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 TMC7Q7Z402 723 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 DRC3Q9H069 523 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 SNX14Q9Y5W7 946 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 AFPP02771 609 aaKnown RBP11.93□□□□□ -0.5
VPS8-227ENST00000625842 HSPA6P17066 643 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 ADORA1P30542 326 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 TFDP2Q14188 446 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 CCDC62Q6P9F0 684 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 CPLX4Q7Z7G2 160 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 ERICH1Q86X53 443 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 CSGALNACT1Q8TDX6 532 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 DHTKD1Q96HY7 919 aaPredicted RBP11.93□□□□□ -0.5
VPS8-227ENST00000625842 GPR101Q96P66 508 aaPredicted RBP11.93□□□□□ -0.5
VPS8-227ENST00000625842 IFNKQ9P0W0 207 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 DNAI1Q9UI46 699 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 GOLGA8MH3BSY2 632 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 CTSHP09668 335 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 RALBP11234 206 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 SH3RF3Q8TEJ3 882 aaPredicted RBP11.93□□□□□ -0.5
VPS8-227ENST00000625842 SCG3Q8WXD2 468 aaKnown RBP11.93□□□□□ -0.5
VPS8-227ENST00000625842 PBXIP1Q96AQ6 731 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 TMX1Q9H3N1 280 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 PCDHB15Q9Y5E8 787 aa11.93□□□□□ -0.5
VPS8-227ENST00000625842 CFAP99D6REC4 459 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 TTI1O43156 1089 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 PFKFB2O60825 505 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 SLC4A1P02730 911 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 ACADMP11310 421 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 RCAN1P53805 252 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 JADE1Q6IE81 842 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 SWSAP1Q6NVH7 229 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 TEX12Q9BXU0 123 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 SP110Q9HB58 689 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 GABBR1Q9UBS5 961 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 CPSF1Q10570 1443 aaKnown RBP11.92□□□□□ -0.5
VPS8-227ENST00000625842 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 SYNCRIPO60506 623 aaKnown RBP11.92□□□□□ -0.5
VPS8-227ENST00000625842 PAX3P23760 479 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 PEX3P56589 373 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 PHEXP78562 749 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 ZNF557Q8N988 423 aaPredicted RBP11.92□□□□□ -0.5
VPS8-227ENST00000625842 SDCCAG3Q96C92 435 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 SPON2Q9BUD6 331 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 OLA1Q9NTK5 396 aaKnown RBP11.92□□□□□ -0.5
VPS8-227ENST00000625842 HOXA13P31271 388 aaPredicted RBP11.92□□□□□ -0.5
VPS8-227ENST00000625842 NLRP12P59046 1061 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 NECAB2Q7Z6G3 386 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 OSCP1Q8WVF1 389 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 NYAP2Q9P242 653 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 GDAQ9Y2T3 454 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 GCKP35557 465 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 GRIK1P39086 918 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 CREMQ03060 361 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 TMED2Q15363 201 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 LONRF2Q1L5Z9 754 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 LCORLQ8N3X6 602 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 RIN2Q8WYP3 895 aaPredicted RBP11.92□□□□□ -0.5
VPS8-227ENST00000625842 CALR3Q96L12 384 aaKnown RBP11.92□□□□□ -0.5
VPS8-227ENST00000625842 VCPKMTQ9H867 229 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms