RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 POLD1P28340 1107 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 SKOR1P84550 965 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 KCTD19Q17RG1 926 aaPredicted RBP12.31□□□□□ -0.44
VARS2-213ENST00000625423 ZDHHC15Q96MV8 337 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
VARS2-213ENST00000625423 AP1M1Q9BXS5 423 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 VAV3Q9UKW4 847 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 UBR3Q6ZT12 1888 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 FLOT1O75955 427 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 NDUFB10O96000 172 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 ZNF76P36508 570 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 PRKCIP41743 596 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 MREGQ8N565 214 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 PIGOQ8TEQ8 1089 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
VARS2-213ENST00000625423 METTL14Q9HCE5 456 aaKnown RBP12.3□□□□□ -0.44
VARS2-213ENST00000625423 RABGAP1Q9Y3P9 1069 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 TMCO5BA8MYB1 307 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 CES2O00748 559 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 FOSP01100 380 aaPredicted RBP12.3□□□□□ -0.44
VARS2-213ENST00000625423 RPL13P26373 211 aaKnown RBP12.3□□□□□ -0.44
VARS2-213ENST00000625423 ERVK-9P63128 1117 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 HLTFQ14527 1009 aaKnown RBP eCLIP12.3□□□□□ -0.44
VARS2-213ENST00000625423 IFI16Q16666 785 aaKnown RBP12.3□□□□□ -0.44
VARS2-213ENST00000625423 BMT2Q1RMZ1 405 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 SYDE2Q5VT97 1194 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 WHAMMQ8TF30 809 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 PBKQ96KB5 322 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 LRRC37AA6NMS7 1700 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 QSER1Q2KHR3 1735 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 SHTN1A0MZ66 631 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 VGLL3A8MV65 326 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 EBAG9O00559 213 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 OPLAHO14841 1288 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 JAM2P57087 298 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 CTTNQ14247 550 aaKnown RBP12.3□□□□□ -0.44
VARS2-213ENST00000625423 METTL13Q8N6R0 699 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 SCFD2Q8WU76 684 aa12.3□□□□□ -0.44
VARS2-213ENST00000625423 TAF1DQ9H5J8 278 aaPredicted RBP12.3□□□□□ -0.44
VARS2-213ENST00000625423 SLC16A3O15427 465 aaKnown RBP12.29□□□□□ -0.44
VARS2-213ENST00000625423 TGFB1I1O43294 461 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 EYA4O95677 639 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 TATDN1Q6P1N9 297 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 TMEM179Q6ZVK1 233 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 ACTRT1Q8TDG2 376 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 GOLGB1Q14789 3259 aaKnown RBP12.29□□□□□ -0.44
VARS2-213ENST00000625423 DDX3XO00571 662 aaKnown RBP eCLIP12.29□□□□□ -0.44
VARS2-213ENST00000625423 GFPT2O94808 682 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 H2AFZP0C0S5 128 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 NMT1P30419 496 aaKnown RBP12.29□□□□□ -0.44
VARS2-213ENST00000625423 CIITAP33076 1130 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 ABCB5Q2M3G0 1257 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 MCTP2Q6DN12 878 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 RINT1Q6NUQ1 792 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 H2AFVQ71UI9 128 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 PEX26Q7Z412 305 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 DDX42Q86XP3 938 aaKnown RBP eCLIP12.29□□□□□ -0.44
VARS2-213ENST00000625423 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
VARS2-213ENST00000625423 RNPC3Q96LT9 517 aaKnown RBP12.29□□□□□ -0.44
VARS2-213ENST00000625423 SAMM50Q9Y512 469 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 ZBTB39O15060 712 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 ZEB2O60315 1214 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 NPR1P16066 1061 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 JAG1P78504 1218 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 ZC2HC1CQ53FD0 456 aaPredicted RBP12.29□□□□□ -0.44
VARS2-213ENST00000625423 MAATS1Q7Z4T9 603 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 VPS36Q86VN1 386 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 KSR1Q8IVT5 923 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 SPICE1Q8N0Z3 855 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 POLR3CQ9BUI4 534 aaPredicted RBP12.29□□□□□ -0.44
VARS2-213ENST00000625423 DDX47Q9H0S4 455 aaKnown RBP12.29□□□□□ -0.44
VARS2-213ENST00000625423 ISCUQ9H1K1 167 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 FBXL5Q9UKA1 691 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 NENFQ9UMX5 172 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 PLAAQ9Y263 795 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 NOC2LQ9Y3T9 749 aaKnown RBP12.29□□□□□ -0.44
VARS2-213ENST00000625423 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
VARS2-213ENST00000625423 ATAD5Q96QE3 1844 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 FAM170AA1A519 330 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 PGRMC1O00264 195 aaKnown RBP12.28□□□□□ -0.44
VARS2-213ENST00000625423 SART1O43290 800 aaKnown RBP12.28□□□□□ -0.44
VARS2-213ENST00000625423 CHMP2AO43633 222 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 ZBTB48P10074 688 aaPredicted RBP12.28□□□□□ -0.44
VARS2-213ENST00000625423 ECHS1P30084 290 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 MMP14P50281 582 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 TPH2Q8IWU9 490 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 CD302Q8IX05 232 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 MYCT1Q8N699 235 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 GMCL1Q96IK5 515 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 FAM169AQ9Y6X4 670 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 FAM13AO94988 1023 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 BMP3P12645 472 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 HSPA9P38646 679 aaKnown RBP12.28□□□□□ -0.44
VARS2-213ENST00000625423 COG2Q14746 738 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 CEP85LQ5SZL2 805 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 DAAM2Q86T65 1068 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 PACS2Q86VP3 889 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 EFCAB13Q8IY85 973 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 FAM186BQ8IYM0 893 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms