RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ANKRD33Q7Z3H0 272 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 KCNK18Q7Z418 384 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 FMR1NBQ8N0W7 255 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 SLC43A3Q8NBI5 491 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 ATP8B4Q8TF62 1192 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 LRRC15Q8TF66 581 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 KATNAL1Q9BW62 490 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 CEP290O15078 2479 aa22.14■■□□□ 1.14
PDLIM2-221ENST00000622702 SCN10AQ9Y5Y9 1956 aa22.14■■□□□ 1.14
PDLIM2-221ENST00000622702 MROH7Q68CQ1 1323 aa22.14■■□□□ 1.14
PDLIM2-221ENST00000622702 STAT6P42226 847 aa22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 SNW1Q13573 536 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 NBPF20Q3BBV1 942 aa22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 ANO5Q75V66 913 aa22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 CKAP2LQ8IYA6 745 aa22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 PPP1R13LQ8WUF5 828 aa22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 BBXQ8WY36 941 aaPredicted RBP22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 CUEDC2Q9H467 287 aa22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 NRBP2Q9NSY0 501 aa22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 ANKEF1Q9NU02 776 aa22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 BLOC1S4Q9NUP1 217 aa22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 USP25Q9UHP3 1055 aa22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 DBR1Q9UK59 544 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 ZMYND8Q9ULU4 1186 aaPredicted RBP22.14■■□□□ 1.13
PDLIM2-221ENST00000622702 DCDC2CA8MYV0 355 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 EYA4O95677 639 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 SYN1P17600 705 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 MARK3P27448 753 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 PSEN2P49810 448 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 FAM47CQ5HY64 1035 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 OTUD6AQ7L8S5 288 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 PIGOQ8TEQ8 1089 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 RAD54LQ92698 747 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 DHX58Q96C10 678 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 TOX2Q96NM4 488 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 NIFKQ9BYG3 293 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 SEZ6LQ9BYH1 1024 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 RNPEPQ9H4A4 650 aa22.13■■□□□ 1.13
PDLIM2-221ENST00000622702 E9PMD0 336 aa22.12■■□□□ 1.13
PDLIM2-221ENST00000622702 ZBTB39O15060 712 aa22.12■■□□□ 1.13
PDLIM2-221ENST00000622702 HBP1O60381 514 aa22.12■■□□□ 1.13
PDLIM2-221ENST00000622702 ZNF202O95125 648 aa22.12■■□□□ 1.13
PDLIM2-221ENST00000622702 MFSD10Q14728 455 aa22.12■■□□□ 1.13
PDLIM2-221ENST00000622702 KIAA0753Q2KHM9 967 aa22.12■■□□□ 1.13
PDLIM2-221ENST00000622702 PRDM5Q9NQX1 630 aaPredicted RBP22.12■■□□□ 1.13
PDLIM2-221ENST00000622702 A0A087WWV3 80 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 ACTN4O43707 911 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 NR1I2O75469 434 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 CLTBP09497 229 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 SLFN14P0C7P3 912 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 RARRES1P49788 294 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 FAAP100Q0VG06 881 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 FAM126BQ8IXS8 530 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 LARP4BQ92615 738 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 MAGEF1Q9HAY2 307 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 PRKAG2Q9UGJ0 569 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 SEPT9Q9UHD8 586 aaPredicted RBP22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 TRPC6Q9Y210 931 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 LOXHD1Q8IVV2 1947 aa22.11■■□□□ 1.13
PDLIM2-221ENST00000622702 TLR3O15455 904 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 MBD3O95983 291 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 PLA2G4BP0C869 781 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 TARBP2Q15633 366 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 NFKBIBQ15653 356 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 LONRF3Q496Y0 759 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 PRPF38BQ5VTL8 546 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 NFRKBQ6P4R8 1299 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 SYT2Q8N9I0 419 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 GPT2Q8TD30 523 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 TIGD1Q96MW7 591 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 BHMT2Q9H2M3 363 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 PDLIM7Q9NR12 457 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 PCDH10Q9P2E7 1040 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 PPME1Q9Y570 386 aa22.1■■□□□ 1.13
PDLIM2-221ENST00000622702 TMEM150BA6NC51 233 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 SLC12A3P55017 1021 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 PLA2G4FQ68DD2 849 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 KRBA2Q6ZNG9 492 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 TRMT1LQ7Z2T5 733 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 SH3RF1Q7Z6J0 888 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 TRPV6Q9H1D0 765 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 CYP26B1Q9NR63 512 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 TMEM39AQ9NV64 488 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 KBTBD4Q9NVX7 518 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 DACT1Q9NYF0 836 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 SERTAD1Q9UHV2 236 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 COL1A2P08123 1366 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 ZBTB42B2RXF5 422 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 CD4P01730 458 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 INSRRP14616 1297 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 NPEPPSP55786 919 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 MCM6Q14566 821 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 XKR9Q5GH70 373 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 ZNF484Q5JVG2 852 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 CEP57L1Q8IYX8 460 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 C7orf31Q8N865 590 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 CEP170P1Q96L14 293 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 CEP89Q96ST8 783 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 TNMDQ9H2S6 317 aa22.09■■□□□ 1.13
PDLIM2-221ENST00000622702 ARHGEF35A5YM69 484 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms