RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 KRT27Q7Z3Y8 459 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 ZNF34Q8IZ26 560 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 LRRC1Q9BTT6 524 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 CCND2P30279 289 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 SLC12A2P55011 1212 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 SARNPP82979 210 aaKnown RBP17.42■□□□□ 0.38
GABRB3-215ENST00000622697 PPP2R5AQ15172 486 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 PADI6Q6TGC4 694 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 NEDD1Q8NHV4 660 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 ADGRB1O14514 1584 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 SALL3Q9BXA9 1300 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 HDLBPQ00341 1268 aaKnown RBP17.42■□□□□ 0.38
GABRB3-215ENST00000622697 RCN2Q14257 317 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 ADSSL1Q8N142 457 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.42■□□□□ 0.38
GABRB3-215ENST00000622697 AK9Q5TCS8 1911 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 HMGB1P1B2RPK0 211 aaPredicted RBP17.41■□□□□ 0.38
GABRB3-215ENST00000622697 FAM47CQ5HY64 1035 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 PPP4R1Q8TF05 950 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 RAVER2Q9HCJ3 691 aaKnown RBP17.41■□□□□ 0.38
GABRB3-215ENST00000622697 RWDD2BP57060 319 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 GABPAQ06546 454 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 DRAP1Q14919 205 aaPredicted RBP17.41■□□□□ 0.38
GABRB3-215ENST00000622697 PDXDC2PQ6P474 469 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 CFAP61Q8NHU2 1237 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 TRIM11Q96F44 468 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 RIOK1Q9BRS2 568 aaKnown RBP17.41■□□□□ 0.38
GABRB3-215ENST00000622697 TMEM60Q9H2L4 133 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 MLXIPLQ9NP71 852 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 ANAPC7Q9UJX3 599 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 A0A1W2PQC6 194 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 LMNB2Q03252 620 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 GLYCTKQ8IVS8 523 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 PRELPP51888 382 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 ANKRD36BP1Q96IX9 119 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 ELAC2Q9BQ52 826 aaKnown RBP17.41■□□□□ 0.38
GABRB3-215ENST00000622697 VCX3BQ9H321 246 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 ARHGAP27Q6ZUM4 889 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 C7orf31Q8N865 590 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 SLC17A8Q8NDX2 589 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 ANKRD7Q92527 254 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 SH2D3AQ9BRG2 576 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
GABRB3-215ENST00000622697 EXOC1LA0A1B0GW35 172 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 NFIXQ14938 502 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 KLHL29Q96CT2 875 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 NACA2Q9H009 215 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 RGL1Q9NZL6 768 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 MTMR1Q13613 665 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 SLMAPQ14BN4 828 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 RCSD1Q6JBY9 416 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 SPATA4Q8NEY3 305 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 ZWILCHQ9H900 591 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 MRPL47Q9HD33 250 aaKnown RBP17.4■□□□□ 0.38
GABRB3-215ENST00000622697 PFDN4Q9NQP4 134 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 ADAMTS13Q76LX8 1427 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 A6NJR5 290 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 HIBCHQ6NVY1 386 aaPredicted RBP17.4■□□□□ 0.38
GABRB3-215ENST00000622697 PDXDC1Q6P996 788 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 FAM149B1Q96BN6 582 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 CNOT8Q9UFF9 292 aaKnown RBP17.4■□□□□ 0.38
GABRB3-215ENST00000622697 GYPCP04921 128 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 KCNB1Q14721 858 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 GLE1Q53GS7 698 aaKnown RBP17.4■□□□□ 0.38
GABRB3-215ENST00000622697 RINT1Q6NUQ1 792 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 RHOT2Q8IXI1 618 aa17.4■□□□□ 0.38
GABRB3-215ENST00000622697 JPH2Q9BR39 696 aaPredicted RBP17.4■□□□□ 0.38
GABRB3-215ENST00000622697 CCDC188H7C350 402 aa17.39■□□□□ 0.38
GABRB3-215ENST00000622697 MAGOHP61326 146 aaKnown RBP17.39■□□□□ 0.38
GABRB3-215ENST00000622697 MASTLQ96GX5 879 aa17.39■□□□□ 0.38
GABRB3-215ENST00000622697 SCYL1Q96KG9 808 aa17.39■□□□□ 0.38
GABRB3-215ENST00000622697 M0QZ92 97 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 SSTR3P32745 418 aaPredicted RBP17.39■□□□□ 0.37
GABRB3-215ENST00000622697 RNF207Q6ZRF8 634 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 KCTD6Q8NC69 237 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 MSTO1Q9BUK6 570 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 SPZ1Q9BXG8 430 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 CAMTA2O94983 1202 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 BBS9Q3SYG4 887 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 NUGGCQ68CJ6 796 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 FAM160B2Q86V87 743 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 RIN2Q8WYP3 895 aaPredicted RBP17.39■□□□□ 0.37
GABRB3-215ENST00000622697 K7ERI5 159 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 HSPA6P17066 643 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 SLC8A1P32418 973 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 MSH2P43246 934 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 RASGRP2Q7LDG7 609 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 SCYL3Q8IZE3 742 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 SAAL1Q96ER3 474 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 ECE2O60344 883 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 GMNNO75496 209 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 ABL1P00519 1130 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 DARS2Q6PI48 645 aaKnown RBP17.39■□□□□ 0.37
GABRB3-215ENST00000622697 ARHGEF18Q6ZSZ5 1173 aa17.39■□□□□ 0.37
GABRB3-215ENST00000622697 ZNF233A6NK53 670 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 PSAPP07602 524 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 ACTN1P12814 892 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 NMT1P30419 496 aaKnown RBP17.38■□□□□ 0.37
GABRB3-215ENST00000622697 BAG6P46379 1132 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms