RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 PIK3R6Q5UE93 754 aa6.57□□□□□ -1.36
BRCA1-229ENST00000621897 RTN4RL1Q86UN2 441 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-229ENST00000621897 CIR1Q86X95 450 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-229ENST00000621897 FOXRED1Q96CU9 486 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-229ENST00000621897 GNRHR2Q96P88 292 aa6.57□□□□□ -1.36
BRCA1-229ENST00000621897 LRRC37BQ96QE4 947 aa6.57□□□□□ -1.36
BRCA1-229ENST00000621897 KIAA1683Q9H0B3 1180 aa6.57□□□□□ -1.36
BRCA1-229ENST00000621897 CD248Q9HCU0 757 aa6.57□□□□□ -1.36
BRCA1-229ENST00000621897 CD2APQ9Y5K6 639 aa6.57□□□□□ -1.36
BRCA1-229ENST00000621897 PTPDC1A2A3K4 754 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 RFPL3O75679 317 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 JMJD7P0C870 316 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 ZNF20P17024 532 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 KIF11P52732 1056 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 MOGSQ13724 837 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 TBR1Q16650 682 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 RNF151Q2KHN1 245 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 CC2D1AQ6P1N0 951 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-229ENST00000621897 CXXC5Q7LFL8 322 aaKnown RBP6.56□□□□□ -1.36
BRCA1-229ENST00000621897 IFNL2Q8IZJ0 200 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 LMF1Q96S06 567 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 SEC61A2Q9H9S3 476 aa6.56□□□□□ -1.36
BRCA1-229ENST00000621897 FAM83GA6ND36 823 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 PATE3B3GLJ2 98 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 CBX4O00257 560 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 HMGCRP04035 888 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 INSRRP14616 1297 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 EIF4HQ15056 248 aaKnown RBP6.55□□□□□ -1.36
BRCA1-229ENST00000621897 ARHGAP44Q17R89 818 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 CDCA2Q69YH5 1023 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-229ENST00000621897 TMEM200BQ69YZ2 307 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 OTOP2Q7RTS6 562 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 JAZF1Q86VZ6 243 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 CHST13Q8NET6 341 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 NEIL1Q96FI4 390 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-229ENST00000621897 WWC2-AS2Q96NR7 200 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 C1QTNF3Q9BXJ4 246 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 FANCLQ9NW38 375 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 FBXO10Q9UK96 956 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 JAG2Q9Y219 1238 aa6.55□□□□□ -1.36
BRCA1-229ENST00000621897 ALDH6A1Q02252 535 aaKnown RBP6.54□□□□□ -1.36
BRCA1-229ENST00000621897 CDSNQ15517 529 aa6.54□□□□□ -1.36
BRCA1-229ENST00000621897 CREB3L3Q68CJ9 461 aa6.54□□□□□ -1.36
BRCA1-229ENST00000621897 BCL6BQ8N143 479 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-229ENST00000621897 GPR20Q99678 358 aa6.54□□□□□ -1.36
BRCA1-229ENST00000621897 B4GALT6Q9UBX8 382 aa6.54□□□□□ -1.36
BRCA1-229ENST00000621897 MRPL42Q9Y6G3 142 aaKnown RBP6.54□□□□□ -1.36
BRCA1-229ENST00000621897 A0A0G2JNJ9 132 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 MATN2O00339 956 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 FOXS1O43638 330 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 PRLP01236 227 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 FNTBP49356 437 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 STAT5BP51692 787 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 PCOLCEQ15113 449 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 TCEA2Q15560 299 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 CFAP100Q494V2 611 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 TRIM68Q6AZZ1 485 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 GRAMD4Q6IC98 578 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 TCTN3Q6NUS6 607 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 DBX2Q6ZNG2 339 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 FILIP1Q7Z7B0 1213 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 HOMER1Q86YM7 354 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 KIAA1958Q8N8K9 716 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 WDR48Q8TAF3 677 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 CABP5Q9NP86 173 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 MAGEC2Q9UBF1 373 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-229ENST00000621897 Q9UFV3 132 aa6.53□□□□□ -1.36
BRCA1-229ENST00000621897 PTX3P26022 381 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-229ENST00000621897 RAC3P60763 192 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 PUM1Q14671 1186 aaKnown RBP eCLIP6.52□□□□□ -1.37
BRCA1-229ENST00000621897 ZXDCQ2QGD7 858 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-229ENST00000621897 ZNF568Q3ZCX4 644 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 ZMAT1Q5H9K5 638 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 AGBL4Q5VU57 503 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 ZNF585AQ6P3V2 769 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 C16orf86Q6ZW13 317 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 UBE2R2Q712K3 238 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-229ENST00000621897 TAX1BP1Q86VP1 789 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 SYNPOQ8N3V7 929 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 Q8TCH9 128 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 CALML6Q8TD86 181 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 APPBP2Q92624 585 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 DVL3Q92997 716 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-229ENST00000621897 SCYL1Q96KG9 808 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 FOXB1Q99853 325 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 DPYSL5Q9BPU6 564 aa6.52□□□□□ -1.37
BRCA1-229ENST00000621897 H7C1D1 291 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 ARHGAP6O43182 974 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 ZNF623O75123 536 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 SLC9A1P19634 815 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 APEX1P27695 318 aaKnown RBP6.51□□□□□ -1.37
BRCA1-229ENST00000621897 FLT3P36888 993 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 RGS3P49796 1198 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 MRE11P49959 708 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 CFHR4Q92496 578 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 C16orf92Q96LL3 132 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 MTFR1LQ9H019 292 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 KLC2Q9H0B6 622 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 PCIF1Q9H4Z3 704 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 ACSS2Q9NR19 701 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms