RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 YWHABP31946 246 aaKnown RBP16.04■□□□□ 0.16
CBWD3-217ENST00000621474 NASPP49321 788 aaPredicted RBP16.04■□□□□ 0.16
CBWD3-217ENST00000621474 EPHB4P54760 987 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 CEBPZQ03701 1054 aaKnown RBP16.04■□□□□ 0.16
CBWD3-217ENST00000621474 MBTPS1Q14703 1052 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 ZNF618Q5T7W0 954 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 PRPF38BQ5VTL8 546 aaKnown RBP16.04■□□□□ 0.16
CBWD3-217ENST00000621474 RPAINQ86UA6 219 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 TNPO1Q92973 898 aaKnown RBP16.04■□□□□ 0.16
CBWD3-217ENST00000621474 CHAMP1Q96JM3 812 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 POLR3CQ9BUI4 534 aaPredicted RBP16.04■□□□□ 0.16
CBWD3-217ENST00000621474 LRWD1Q9UFC0 647 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 SEPT9Q9UHD8 586 aaPredicted RBP16.04■□□□□ 0.16
CBWD3-217ENST00000621474 PCDHA2Q9Y5H9 948 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 CDH23Q9H251 3354 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 A0A087WWV3 80 aa16.03■□□□□ 0.16
CBWD3-217ENST00000621474 BMP15O95972 392 aa16.03■□□□□ 0.16
CBWD3-217ENST00000621474 NPEPPSP55786 919 aa16.03■□□□□ 0.16
CBWD3-217ENST00000621474 BFSP2Q13515 415 aa16.03■□□□□ 0.16
CBWD3-217ENST00000621474 FOXD4L6Q3SYB3 417 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-217ENST00000621474 TAF2Q6P1X5 1199 aa16.03■□□□□ 0.16
CBWD3-217ENST00000621474 FOXD4L3Q6VB84 417 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-217ENST00000621474 DNAJB3Q8WWF6 145 aa16.03■□□□□ 0.16
CBWD3-217ENST00000621474 OSBPL7Q9BZF2 842 aa16.03■□□□□ 0.16
CBWD3-217ENST00000621474 TUFT1Q9NNX1 390 aa16.03■□□□□ 0.16
CBWD3-217ENST00000621474 NRBP2Q9NSY0 501 aa16.03■□□□□ 0.16
CBWD3-217ENST00000621474 CEP131Q9UPN4 1083 aa16.03■□□□□ 0.16
CBWD3-217ENST00000621474 MORC2Q9Y6X9 1032 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-217ENST00000621474 MARCKSP29966 332 aaPredicted RBP16.02■□□□□ 0.16
CBWD3-217ENST00000621474 THPOP40225 353 aa16.02■□□□□ 0.16
CBWD3-217ENST00000621474 SLC39A14Q15043 492 aa16.02■□□□□ 0.16
CBWD3-217ENST00000621474 MTERF2Q49AM1 385 aa16.02■□□□□ 0.16
CBWD3-217ENST00000621474 POTEGQ6S5H5 508 aa16.02■□□□□ 0.16
CBWD3-217ENST00000621474 C16orf59Q7L2K0 433 aa16.02■□□□□ 0.16
CBWD3-217ENST00000621474 LINC00301Q8NCQ3 95 aa16.02■□□□□ 0.16
CBWD3-217ENST00000621474 CYP26B1Q9NR63 512 aa16.02■□□□□ 0.16
CBWD3-217ENST00000621474 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.16
CBWD3-217ENST00000621474 TFIP11Q9UBB9 837 aaKnown RBP16.02■□□□□ 0.16
CBWD3-217ENST00000621474 FBXO2Q9UK22 296 aaPredicted RBP16.02■□□□□ 0.16
CBWD3-217ENST00000621474 IGKV6-21A0A0C4DH24 114 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 SMIM35A0A1B0GVV1 85 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 DDX11L8A8MPP1 907 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 DKC1O60832 514 aaKnown RBP eCLIP16.01■□□□□ 0.15
CBWD3-217ENST00000621474 SELPP16109 830 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 MGAT3Q09327 533 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
CBWD3-217ENST00000621474 DRP2Q13474 957 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 HAUS3Q68CZ6 603 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 LRRC8DQ7L1W4 858 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 KIAA0319LQ8IZA0 1049 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 PIGOQ8TEQ8 1089 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 RAB34Q9BZG1 259 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
CBWD3-217ENST00000621474 TRIOBPQ9H2D6 2365 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 NBNO60934 754 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 CAND2O75155 1236 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 CHRNA1P02708 482 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 CTSHP09668 335 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 RARRES1P49788 294 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 DNM1Q05193 864 aaKnown RBP16.01■□□□□ 0.15
CBWD3-217ENST00000621474 FPGSQ05932 587 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 CHRDL2Q6WN34 429 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 LRRC71Q8N4P6 559 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 TMEM199Q8N511 208 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 CCDC155Q8N6L0 562 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 ERMNQ8TAM6 284 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 SNX29Q8TEQ0 813 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 CLIC6Q96NY7 704 aa16.01■□□□□ 0.15
CBWD3-217ENST00000621474 LBHD1Q9BQE6 289 aaPredicted RBP16.01■□□□□ 0.15
CBWD3-217ENST00000621474 FAM49AQ9H0Q0 323 aaPredicted RBP16.01■□□□□ 0.15
CBWD3-217ENST00000621474 DHX33Q9H6R0 707 aaKnown RBP16.01■□□□□ 0.15
CBWD3-217ENST00000621474 SRPRBQ9Y5M8 271 aaKnown RBP16.01■□□□□ 0.15
CBWD3-217ENST00000621474 BMP8BP34820 402 aa16■□□□□ 0.15
CBWD3-217ENST00000621474 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
CBWD3-217ENST00000621474 CCT6AP40227 531 aaKnown RBP16■□□□□ 0.15
CBWD3-217ENST00000621474 CLCN3P51790 818 aa16■□□□□ 0.15
CBWD3-217ENST00000621474 TBC1D8BQ0IIM8 1120 aa16■□□□□ 0.15
CBWD3-217ENST00000621474 FAM26DQ5JW98 314 aa16■□□□□ 0.15
CBWD3-217ENST00000621474 HYIQ5T013 277 aa16■□□□□ 0.15
CBWD3-217ENST00000621474 KCNK18Q7Z418 384 aa16■□□□□ 0.15
CBWD3-217ENST00000621474 LRRC15Q8TF66 581 aa16■□□□□ 0.15
CBWD3-217ENST00000621474 CEP170P1Q96L14 293 aa16■□□□□ 0.15
CBWD3-217ENST00000621474 AK8Q96MA6 479 aa16■□□□□ 0.15
CBWD3-217ENST00000621474 PTPRSQ13332 1948 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 MAGEB2O15479 319 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 MAFO75444 373 aaPredicted RBP15.99■□□□□ 0.15
CBWD3-217ENST00000621474 ACRP10323 421 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 MUTP22033 750 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 LONP1P36776 959 aaKnown RBP15.99■□□□□ 0.15
CBWD3-217ENST00000621474 TMEM62Q0P6H9 643 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 EFCAB12Q6NXP0 572 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 USP49Q70CQ1 688 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 RETREG2Q8NC44 543 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 ZNF396Q96N95 335 aaPredicted RBP15.99■□□□□ 0.15
CBWD3-217ENST00000621474 PNMA5Q96PV4 448 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 CSRNP2Q9H175 543 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 XPNPEP1Q9NQW7 623 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 ANKEF1Q9NU02 776 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 KIAA1024Q9UPX6 916 aa15.99■□□□□ 0.15
CBWD3-217ENST00000621474 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms