RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 SH2D3AQ9BRG2 576 aa23.39■■□□□ 1.34
LIME1-210ENST00000621325 CEP72Q9P209 647 aa23.39■■□□□ 1.34
LIME1-210ENST00000621325 PUF60Q9UHX1 559 aaKnown RBP23.39■■□□□ 1.34
LIME1-210ENST00000621325 SSC5DA1L4H1 1573 aa23.39■■□□□ 1.33
LIME1-210ENST00000621325 TLR2O60603 784 aa23.39■■□□□ 1.33
LIME1-210ENST00000621325 MAPK7Q13164 816 aa23.39■■□□□ 1.33
LIME1-210ENST00000621325 TEX35Q5T0J7 233 aa23.39■■□□□ 1.33
LIME1-210ENST00000621325 ZNF720Q7Z2F6 126 aa23.39■■□□□ 1.33
LIME1-210ENST00000621325 PARP14Q460N5 1801 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 SRCAPQ6ZRS2 3230 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 TMEM150BA6NC51 233 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 ENC1O14682 589 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 HIP1RO75146 1068 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 P4HBP07237 508 aaKnown RBP23.38■■□□□ 1.33
LIME1-210ENST00000621325 H2AFXP16104 143 aaPredicted RBP23.38■■□□□ 1.33
LIME1-210ENST00000621325 ODR4Q5SWX8 454 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 HGSNATQ68CP4 663 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 PADI6Q6TGC4 694 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 TRMT1LQ7Z2T5 733 aaKnown RBP23.38■■□□□ 1.33
LIME1-210ENST00000621325 FAM178BQ8IXR5 827 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 EDEM3Q9BZQ6 932 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 MAP3K20Q9NYL2 800 aaKnown RBP23.38■■□□□ 1.33
LIME1-210ENST00000621325 PCDHB13Q9Y5F0 798 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 EIF3DO15371 548 aaKnown RBP eCLIP23.38■■□□□ 1.33
LIME1-210ENST00000621325 ACTN1P12814 892 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 DCAF17Q5H9S7 520 aaPredicted RBP23.38■■□□□ 1.33
LIME1-210ENST00000621325 ARHGEF16Q5VV41 709 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 SNRNP48Q6IEG0 339 aaKnown RBP23.38■■□□□ 1.33
LIME1-210ENST00000621325 ZNF662Q6ZS27 426 aa23.38■■□□□ 1.33
LIME1-210ENST00000621325 RSRC2Q7L4I2 434 aaKnown RBP23.38■■□□□ 1.33
LIME1-210ENST00000621325 VAV2P52735 878 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 SPA17Q15506 151 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 UGCGQ16739 394 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 NEK9Q8TD19 979 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 DEF6Q9H4E7 631 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 ODF2LQ9ULJ1 636 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 RLFQ13129 1914 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 TESPA1A2RU30 521 aaPredicted RBP23.37■■□□□ 1.33
LIME1-210ENST00000621325 KRT86O43790 486 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 SLC9A1P19634 815 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 GUCY2CP25092 1073 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 AMPD2Q01433 879 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 OGFRQ9NZT2 677 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 KCND2Q9NZV8 630 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 HDAC6Q9UBN7 1215 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 ZNF214Q9UL59 606 aaPredicted RBP23.37■■□□□ 1.33
LIME1-210ENST00000621325 PCDHA13Q9Y5I0 950 aa23.37■■□□□ 1.33
LIME1-210ENST00000621325 MACROD2A1Z1Q3 448 aa23.36■■□□□ 1.33
LIME1-210ENST00000621325 AKR1B10O60218 316 aa23.36■■□□□ 1.33
LIME1-210ENST00000621325 XRCC5P13010 732 aaKnown RBP23.36■■□□□ 1.33
LIME1-210ENST00000621325 RPL13P26373 211 aaKnown RBP23.36■■□□□ 1.33
LIME1-210ENST00000621325 DSG3P32926 999 aa23.36■■□□□ 1.33
LIME1-210ENST00000621325 GABPB1Q06547 395 aaPredicted RBP23.36■■□□□ 1.33
LIME1-210ENST00000621325 TMEM132BQ14DG7 1078 aa23.36■■□□□ 1.33
LIME1-210ENST00000621325 DPY19L2P1Q6NXN4 242 aa23.36■■□□□ 1.33
LIME1-210ENST00000621325 GPC2Q8N158 579 aa23.36■■□□□ 1.33
LIME1-210ENST00000621325 C12orf42Q96LP6 360 aa23.36■■□□□ 1.33
LIME1-210ENST00000621325 IFIH1Q9BYX4 1025 aaKnown RBP23.36■■□□□ 1.33
LIME1-210ENST00000621325 GANQ9H2C0 597 aa23.36■■□□□ 1.33
LIME1-210ENST00000621325 CCNE2O96020 404 aa23.35■■□□□ 1.33
LIME1-210ENST00000621325 AFPP02771 609 aaKnown RBP23.35■■□□□ 1.33
LIME1-210ENST00000621325 GFPT1Q06210 699 aaPredicted RBP23.35■■□□□ 1.33
LIME1-210ENST00000621325 PLS1Q14651 629 aa23.35■■□□□ 1.33
LIME1-210ENST00000621325 ASTE1Q2TB18 679 aaPredicted RBP23.35■■□□□ 1.33
LIME1-210ENST00000621325 TCERG1LQ5VWI1 586 aa23.35■■□□□ 1.33
LIME1-210ENST00000621325 ZNF446Q9NWS9 450 aa23.35■■□□□ 1.33
LIME1-210ENST00000621325 SEL1LQ9UBV2 794 aa23.35■■□□□ 1.33
LIME1-210ENST00000621325 COL11A1P12107 1806 aaPredicted RBP23.35■■□□□ 1.33
LIME1-210ENST00000621325 QARSP47897 775 aaKnown RBP23.35■■□□□ 1.33
LIME1-210ENST00000621325 SRGAP1Q7Z6B7 1085 aa23.35■■□□□ 1.33
LIME1-210ENST00000621325 SAMD3Q8N6K7 520 aa23.35■■□□□ 1.33
LIME1-210ENST00000621325 SLC35C1Q96A29 364 aa23.35■■□□□ 1.33
LIME1-210ENST00000621325 TBC1D22BQ9NU19 505 aa23.35■■□□□ 1.33
LIME1-210ENST00000621325 RNF216Q9NWF9 866 aaPredicted RBP23.35■■□□□ 1.33
LIME1-210ENST00000621325 ADAMTS5Q9UNA0 930 aa23.35■■□□□ 1.33
LIME1-210ENST00000621325 LCA5LO95447 670 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 ATP1A1P05023 1023 aaKnown RBP23.34■■□□□ 1.33
LIME1-210ENST00000621325 FDX1P10109 184 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 EPB41P11171 864 aaKnown RBP23.34■■□□□ 1.33
LIME1-210ENST00000621325 RARRES1P49788 294 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 SFMBT2Q5VUG0 894 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 BORCS6Q96GS4 357 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 PHIPQ8WWQ0 1821 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 CCDC66A2RUB6 948 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 SLC16A3O15427 465 aaKnown RBP23.34■■□□□ 1.33
LIME1-210ENST00000621325 CLCN6P51797 869 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 CHMP4BP1P59074 171 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 ARID5AQ03989 594 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 KIF5AQ12840 1032 aa23.34■■□□□ 1.33
LIME1-210ENST00000621325 TDRD12Q587J7 1177 aaKnown RBP23.34■■□□□ 1.33
LIME1-210ENST00000621325 POLR2AP24928 1970 aaKnown RBP23.34■■□□□ 1.33
LIME1-210ENST00000621325 C19orf81C9J6K1 198 aa23.33■■□□□ 1.33
LIME1-210ENST00000621325 TULP2O00295 520 aa23.33■■□□□ 1.33
LIME1-210ENST00000621325 LMNB1P20700 586 aa23.33■■□□□ 1.33
LIME1-210ENST00000621325 RAPGEF1Q13905 1077 aa23.33■■□□□ 1.33
LIME1-210ENST00000621325 MYO6Q9UM54 1294 aa23.33■■□□□ 1.33
LIME1-210ENST00000621325 ENOX2Q16206 610 aaKnown RBP23.33■■□□□ 1.33
LIME1-210ENST00000621325 CATSPERGQ6ZRH7 1159 aa23.33■■□□□ 1.33
LIME1-210ENST00000621325 GOLGA1Q92805 767 aa23.33■■□□□ 1.33
LIME1-210ENST00000621325 PNMA2Q9UL42 364 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms