RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 DEXIO95424 95 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 GGPS1O95749 300 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 F2P00734 622 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 PFKMP08237 780 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 GNA11P29992 359 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 PDIA3P30101 505 aaKnown RBP6.9□□□□□ -1.3
SSX4B-202ENST00000619890 ADD1P35611 737 aaKnown RBP6.9□□□□□ -1.3
SSX4B-202ENST00000619890 SREBF1P36956 1147 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 MRPS9P82933 396 aaKnown RBP6.9□□□□□ -1.3
SSX4B-202ENST00000619890 MTMR1Q13613 665 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 LY6KQ17RY6 165 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 CELF3Q5SZQ8 465 aaKnown RBP6.9□□□□□ -1.3
SSX4B-202ENST00000619890 MYSM1Q5VVJ2 828 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 METTL7BQ6UX53 244 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 DEFB128Q7Z7B8 93 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 SESTD1Q86VW0 696 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 DHX37Q8IY37 1157 aaKnown RBP6.9□□□□□ -1.3
SSX4B-202ENST00000619890 REXO1Q8N1G1 1221 aaKnown RBP6.9□□□□□ -1.3
SSX4B-202ENST00000619890 CCDC155Q8N6L0 562 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 AFG1LQ8WV93 481 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 COPS5Q92905 334 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 PABPC5Q96DU9 382 aaKnown RBP6.9□□□□□ -1.3
SSX4B-202ENST00000619890 SENP7Q9BQF6 1050 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 ANO3Q9BYT9 981 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 C22orf23Q9BZE7 217 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 ZMYND12Q9H0C1 365 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 C6orf50Q9HD87 102 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 SH3GLB2Q9NR46 395 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 V9GY48 417 aaPredicted RBP6.9□□□□□ -1.3
SSX4B-202ENST00000619890 GRIN2DO15399 1336 aa6.9□□□□□ -1.3
SSX4B-202ENST00000619890 PLXNA3P51805 1871 aa6.9□□□□□ -1.31
SSX4B-202ENST00000619890 SMCO2A6NFE2 343 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 SPATA31C2B4DYI2 1134 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 B4GALT4O60513 344 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 PPFIA4O75335 1185 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 ACTN1P12814 892 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 XBP1P17861 261 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 CLK2P49760 499 aaKnown RBP6.89□□□□□ -1.31
SSX4B-202ENST00000619890 ERVK-21P61565 698 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 ZXDAP98168 799 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 SETQ01105 290 aaPredicted RBP6.89□□□□□ -1.31
SSX4B-202ENST00000619890 COL19A1Q14993 1142 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 SMAD2Q15796 467 aaKnown RBP6.89□□□□□ -1.31
SSX4B-202ENST00000619890 NTRK3Q16288 839 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 UBE2SQ16763 222 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 TSR1Q2NL82 804 aaKnown RBP6.89□□□□□ -1.31
SSX4B-202ENST00000619890 TMEM63BQ5T3F8 832 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 PHKBQ93100 1093 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 NKD2Q969F2 451 aaPredicted RBP6.89□□□□□ -1.31
SSX4B-202ENST00000619890 SPATA33Q96N06 139 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 SLC26A6Q9BXS9 759 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 MLXIPQ9HAP2 919 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 ZNF215Q9UL58 517 aaPredicted RBP6.89□□□□□ -1.31
SSX4B-202ENST00000619890 MTUS1Q9ULD2 1270 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 PCDHA6Q9UN73 950 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 PCDHA8Q9Y5H6 950 aa6.89□□□□□ -1.31
SSX4B-202ENST00000619890 MAP1BP46821 2468 aaKnown RBP6.89□□□□□ -1.31
SSX4B-202ENST00000619890 NFASCO94856 1347 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 EMSYQ7Z589 1322 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 PFKFB2O60825 505 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 PARNO95453 639 aaKnown RBP6.88□□□□□ -1.31
SSX4B-202ENST00000619890 PTGS1P23219 599 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 RFC2P35250 354 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 LTBRP36941 435 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 PSMC6P62333 389 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 CCT2P78371 535 aaKnown RBP6.88□□□□□ -1.31
SSX4B-202ENST00000619890 SSRP1Q08945 709 aaKnown RBP6.88□□□□□ -1.31
SSX4B-202ENST00000619890 BFSP2Q13515 415 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 AMHR2Q16671 573 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 NBPF20Q3BBV1 942 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 HSDL1Q3SXM5 330 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 C8orf34Q49A92 452 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 CEP55Q53EZ4 464 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 FAM47CQ5HY64 1035 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 GALNT17Q6IS24 598 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 NIPA1Q7RTP0 329 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 C7orf31Q8N865 590 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 CAGE1Q8TC20 777 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 WASF1Q92558 559 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 PCMTD1Q96MG8 357 aaPredicted RBP6.88□□□□□ -1.31
SSX4B-202ENST00000619890 TGS1Q96RS0 853 aaKnown RBP6.88□□□□□ -1.31
SSX4B-202ENST00000619890 POP1Q99575 1024 aaKnown RBP6.88□□□□□ -1.31
SSX4B-202ENST00000619890 SLKQ9H2G2 1235 aaPredicted RBP6.88□□□□□ -1.31
SSX4B-202ENST00000619890 UPF2Q9HAU5 1272 aaKnown RBP6.88□□□□□ -1.31
SSX4B-202ENST00000619890 NCOA5Q9HCD5 579 aaKnown RBP6.88□□□□□ -1.31
SSX4B-202ENST00000619890 JADE2Q9NQC1 790 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 GTF2IRD1Q9UHL9 959 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 TCEAL9Q9UHQ7 104 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 RALYQ9UKM9 306 aaKnown RBP6.88□□□□□ -1.31
SSX4B-202ENST00000619890 NOD1Q9Y239 953 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 UBIAD1Q9Y5Z9 338 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 CEP250Q9BV73 2442 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 SPTBN2O15020 2390 aa6.88□□□□□ -1.31
SSX4B-202ENST00000619890 LINC01553A4QN01 128 aa6.87□□□□□ -1.31
SSX4B-202ENST00000619890 H3BRB1 525 aa6.87□□□□□ -1.31
SSX4B-202ENST00000619890 HAS3O00219 553 aa6.87□□□□□ -1.31
SSX4B-202ENST00000619890 CAND2O75155 1236 aa6.87□□□□□ -1.31
SSX4B-202ENST00000619890 LGALS2P05162 132 aa6.87□□□□□ -1.31
SSX4B-202ENST00000619890 CYP3A4P08684 503 aa6.87□□□□□ -1.31
SSX4B-202ENST00000619890 ZNF286BP0CG31 522 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms