RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 MSL1Q68DK7 614 aa25.18■■□□□ 1.62
PCSK6-218ENST00000619160 TTBK2Q6IQ55 1244 aa25.18■■□□□ 1.62
PCSK6-218ENST00000619160 PCDHB13Q9Y5F0 798 aa25.18■■□□□ 1.62
PCSK6-218ENST00000619160 BZW2Q9Y6E2 419 aaKnown RBP25.18■■□□□ 1.62
PCSK6-218ENST00000619160 TATDN2Q93075 761 aa25.17■■□□□ 1.62
PCSK6-218ENST00000619160 CCDC113Q9H0I3 377 aa25.17■■□□□ 1.62
PCSK6-218ENST00000619160 CES2O00748 559 aa25.17■■□□□ 1.62
PCSK6-218ENST00000619160 CLIC2O15247 247 aa25.17■■□□□ 1.62
PCSK6-218ENST00000619160 ZNF211Q13398 564 aaPredicted RBP25.17■■□□□ 1.62
PCSK6-218ENST00000619160 PPP1R7Q15435 360 aa25.17■■□□□ 1.62
PCSK6-218ENST00000619160 AMFRQ9UKV5 643 aa25.17■■□□□ 1.62
PCSK6-218ENST00000619160 SPDYE3A6NKU9 549 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 SRRM3A6NNA2 597 aaPredicted RBP25.16■■□□□ 1.62
PCSK6-218ENST00000619160 EIF1ADQ8N9N8 165 aaKnown RBP25.16■■□□□ 1.62
PCSK6-218ENST00000619160 CUL5Q93034 780 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 GCNT4Q9P109 453 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 AJAP1Q9UKB5 411 aaPredicted RBP25.16■■□□□ 1.62
PCSK6-218ENST00000619160 PCDHA2Q9Y5H9 948 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 KIAA1551Q9HCM1 1747 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 RREB1Q92766 1687 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 KDM3AQ9Y4C1 1321 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 USP17L15C9J2P7 530 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 USP17L13C9JLJ4 530 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 USP17L11C9JVI0 530 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 USP17L18D6R9N7 530 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 USP17L22D6RA61 530 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 USP17L17D6RBQ6 530 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 USP17L19D6RCP7 530 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 USP17L20D6RJB6 530 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 PLTPP55058 493 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 USP17L24Q0WX57 530 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 USP17L6PQ6QN14 398 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 MARCH10Q8NA82 808 aaPredicted RBP25.16■■□□□ 1.62
PCSK6-218ENST00000619160 THOC1Q96FV9 657 aaKnown RBP25.16■■□□□ 1.62
PCSK6-218ENST00000619160 RTFDC1Q9BY42 306 aaPredicted RBP25.16■■□□□ 1.62
PCSK6-218ENST00000619160 NT5C2P49902 561 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 HIBCHQ6NVY1 386 aaPredicted RBP25.16■■□□□ 1.62
PCSK6-218ENST00000619160 LINC00116Q8NCU8 138 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 GLG1Q92896 1179 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 CHMP6Q96FZ7 201 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 SLITRK6Q9H5Y7 841 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 PSTPIP2Q9H939 334 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 FAM114A2Q9NRY5 505 aa25.16■■□□□ 1.62
PCSK6-218ENST00000619160 SHBGP04278 402 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 PPP4CP60510 307 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 NFIXQ14938 502 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 SFR1Q86XK3 245 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 RNF217Q8TC41 542 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 SWAP70Q9UH65 585 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 SNED1Q8TER0 1413 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 A0A1B0GUA9 196 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 KRT13P13646 458 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 MRPL12P52815 198 aaKnown RBP25.15■■□□□ 1.62
PCSK6-218ENST00000619160 GALCP54803 685 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 MARSP56192 900 aaKnown RBP25.15■■□□□ 1.62
PCSK6-218ENST00000619160 BYSLQ13895 437 aaKnown RBP25.15■■□□□ 1.62
PCSK6-218ENST00000619160 ADGRF4Q8IZF3 695 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 SYCE1Q8N0S2 351 aa25.15■■□□□ 1.62
PCSK6-218ENST00000619160 XPO6Q96QU8 1125 aaKnown RBP25.15■■□□□ 1.62
PCSK6-218ENST00000619160 CASP4P49662 377 aa25.14■■□□□ 1.62
PCSK6-218ENST00000619160 DPP8Q6V1X1 898 aaPredicted RBP25.14■■□□□ 1.62
PCSK6-218ENST00000619160 NT5DC3Q86UY8 548 aa25.14■■□□□ 1.62
PCSK6-218ENST00000619160 GLYCTKQ8IVS8 523 aa25.14■■□□□ 1.62
PCSK6-218ENST00000619160 TACO1Q9BSH4 297 aaKnown RBP25.14■■□□□ 1.62
PCSK6-218ENST00000619160 LAMB1P07942 1786 aa25.14■■□□□ 1.62
PCSK6-218ENST00000619160 BTNL10A8MVZ5 291 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 DDX3XO00571 662 aaKnown RBP eCLIP25.14■■□□□ 1.613e-16■■■■□ 21
PCSK6-218ENST00000619160 BUB1BO60566 1050 aaPredicted RBP25.14■■□□□ 1.61
PCSK6-218ENST00000619160 MED24O75448 989 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 AKAP3O75969 853 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 MMEP08473 750 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 IFNAR2P48551 515 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 EGFL6Q8IUX8 553 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 NYXQ9GZU5 481 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 JMJD4Q9H9V9 463 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.14■■□□□ 1.61
PCSK6-218ENST00000619160 SNX24Q9Y343 169 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 SCN7AQ01118 1682 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 CHN1P15882 459 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 SLC10A5Q5PT55 438 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 FOXR2Q6PJQ5 311 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 TPTE2Q6XPS3 522 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 KCTD1Q719H9 257 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 CCDC197Q8NCU1 140 aa25.14■■□□□ 1.61
PCSK6-218ENST00000619160 SUCLA2Q9P2R7 463 aaPredicted RBP25.14■■□□□ 1.61
PCSK6-218ENST00000619160 PPP1R11O60927 126 aaPredicted RBP25.13■■□□□ 1.61
PCSK6-218ENST00000619160 DRD4P21917 467 aa25.13■■□□□ 1.61
PCSK6-218ENST00000619160 GCKP35557 465 aa25.13■■□□□ 1.61
PCSK6-218ENST00000619160 SLCO1A2P46721 670 aa25.13■■□□□ 1.61
PCSK6-218ENST00000619160 EDRF1Q3B7T1 1238 aa25.13■■□□□ 1.61
PCSK6-218ENST00000619160 ZNF804AQ7Z570 1209 aa25.13■■□□□ 1.61
PCSK6-218ENST00000619160 PNMA8AQ86V59 439 aaPredicted RBP25.13■■□□□ 1.61
PCSK6-218ENST00000619160 RTCBQ9Y3I0 505 aaKnown RBP25.13■■□□□ 1.61
PCSK6-218ENST00000619160 RFC4P35249 363 aa25.13■■□□□ 1.61
PCSK6-218ENST00000619160 PSMC6P62333 389 aa25.13■■□□□ 1.61
PCSK6-218ENST00000619160 DR1Q01658 176 aa25.13■■□□□ 1.61
PCSK6-218ENST00000619160 CRYMQ14894 314 aa25.13■■□□□ 1.61
PCSK6-218ENST00000619160 KNOP1Q1ED39 458 aaKnown RBP25.13■■□□□ 1.61
PCSK6-218ENST00000619160 ARSHQ5FYA8 562 aa25.13■■□□□ 1.61
PCSK6-218ENST00000619160 C3orf20Q8ND61 904 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms