RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 SLC12A4Q9UP95 1085 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 ATP2A2P16615 1042 aaKnown RBP17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 CYLC1P35663 651 aaPredicted RBP17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 PPP2R2AP63151 447 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 HHIPL2Q6UWX4 724 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 DCDC2CA8MYV0 355 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 ACTN4O43707 911 aaKnown RBP17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 NQO1P15559 274 aaKnown RBP17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 GABPAQ06546 454 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 STRIP1Q5VSL9 837 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 KRT26Q7Z3Y9 468 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 CASKIN2Q8WXE0 1202 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 PIGSQ96S52 555 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 PCMTD2Q9NV79 361 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 MTMR4Q9NYA4 1195 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 CFAP73A6NFT4 308 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 TACC1O75410 805 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 ZNF268Q14587 947 aaPredicted RBP17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 KCTD19Q17RG1 926 aaPredicted RBP17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 ARMC9Q7Z3E5 817 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 ANKS4BQ8N8V4 417 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 HLA-DOAP06340 250 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 ALDH3A1P30838 453 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 NAPAP54920 295 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 ADAM9Q13443 819 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 ANO7Q6IWH7 933 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 ZFAND2BQ8WV99 257 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 SYMPKQ92797 1274 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 PCDHA4Q9UN74 947 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 HYOU1Q9Y4L1 999 aa17.23■□□□□ 0.35
SEMA3B-214ENST00000619119 CCDC194A0A1B0GVG4 234 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 DDTLA6NHG4 134 aaPredicted RBP17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 KCNJ18B7U540 433 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 IGF2BP3O00425 579 aaKnown RBP eCLIP17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 TNFRSF8P28908 595 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 SHMT1P34896 483 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 ZBED6P86452 979 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 KCNJ12Q14500 433 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 INF2Q27J81 1249 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 TDRD3Q9H7E2 651 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 WDR35Q9P2L0 1181 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 A0A087X0B3 334 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 ATP6V1G1O75348 118 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 RNASE9P60153 205 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 DNAJC14Q6Y2X3 702 aaPredicted RBP17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 C7orf43Q8WVR3 580 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 CHMP6Q96FZ7 201 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 SYT15Q9BQS2 421 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 DNAAF2Q9NVR5 837 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 SCN9AQ15858 1988 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 PPP1R3GB7ZBB8 358 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 CTNND1O60716 968 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 CALML3P27482 149 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 MAGOHP61326 146 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 DBN1Q16643 649 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 RNF220Q5VTB9 566 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 MAGOHBQ96A72 148 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 ABCF3Q9NUQ8 709 aa17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 LIMA1Q9UHB6 759 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-214ENST00000619119 YDJCA8MPS7 323 aa17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 RAD17O75943 681 aa17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 GSTA1P08263 222 aa17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 CTNNA1P35221 906 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 MAGEA10P43363 369 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 ZDHHC15Q96MV8 337 aa17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 NHEJ1Q9H9Q4 299 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 GDF3Q9NR23 364 aa17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 BARHL2Q9NY43 387 aa17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 SEC63Q9UGP8 760 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 MAPK8IP1Q9UQF2 711 aa17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.21■□□□□ 0.358e-7■■□□□ 11.8
SEMA3B-214ENST00000619119 ITIH3Q06033 890 aa17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 KRT12Q99456 494 aa17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 ZNF277Q9NRM2 450 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-214ENST00000619119 TCP1P17987 556 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 SLC16A2P36021 539 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 RRAGBQ5VZM2 374 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 TRIM42Q8IWZ5 723 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 LMNTD2Q8IXW0 634 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 MREGQ8N565 214 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 ATL2Q8NHH9 583 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 CCDC97Q96F63 343 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 RPS6KC1Q96S38 1066 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 ELAC2Q9BQ52 826 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 DNAJC18Q9H819 358 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 PCDHA6Q9UN73 950 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 PCDHA8Q9Y5H6 950 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 CREB3O43889 395 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 UBOX5O94941 541 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 ALADP13716 330 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 HSD17B3P37058 310 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 BAG6P46379 1132 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 ZNF844Q08AG5 666 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 ACBD5Q5T8D3 534 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 ANKRD13CQ8N6S4 541 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 OCEL1Q9H607 264 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 RMI1Q9H9A7 625 aa17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 ZNHIT6Q9NWK9 470 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-214ENST00000619119 KRT16P08779 473 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms