RNA–Protein interactions for RNA: ENST00000618855.4

TMPRSS4-220, Transcript of transmembrane serine protease 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMPRSS4, Length 3,531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-220ENST00000618855 TBK1Q9UHD2 729 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 DBR1Q9UK59 544 aaKnown RBP10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 FAM205AQ6ZU69 1335 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 CETN3O15182 167 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 ORC4O43929 436 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 GBP1P32455 592 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 STX2P32856 288 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 SSR1P43307 286 aaKnown RBP10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 ADAM9Q13443 819 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 SETDB1Q15047 1291 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 NAB2Q15742 525 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 SLC18A3Q16572 532 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 CCDC105Q8IYK2 499 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 FGFR1OP2Q9NVK5 253 aa10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 MED1Q15648 1581 aaPredicted RBP10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 ATXN2Q99700 1313 aaKnown RBP10.38□□□□□ -0.75
TMPRSS4-220ENST00000618855 GNAQP50148 359 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 DR1Q01658 176 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 CALCOCO2Q13137 446 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 SNX1Q13596 522 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 VPS72Q15906 364 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 CALCRLQ16602 461 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 AOC3Q16853 763 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 PIK3R5Q8WYR1 880 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 GLG1Q92896 1179 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 DDX23Q9BUQ8 820 aaKnown RBP10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 TTYH3Q9C0H2 523 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 KDM4CQ9H3R0 1056 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 ETNK1Q9HBU6 452 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 ABCF3Q9NUQ8 709 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 TCEAL9Q9UHQ7 104 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 SSU72P8A0A1W2PR75 194 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 TCRBV5S4A2TA0A5A2 114 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 POTEMA6NI47 508 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 RASSF10A6NK89 507 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 TCP11X1B4DZS4 312 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 RASGRF2O14827 1237 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 KLRC4O43908 158 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 ACSL3O95573 720 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 ACTN1P12814 892 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 ATP2A2P16615 1042 aaKnown RBP10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 VPS41P49754 854 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 PDE6CP51160 858 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 CDK17Q00537 523 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 GRIK3Q13003 919 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 PLS1Q14651 629 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 MUM1Q2TAK8 710 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 FAM26FQ5R3K3 315 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 ZNF662Q6ZS27 426 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 FAM47EQ6ZV65 393 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 BZW1Q7L1Q6 419 aaKnown RBP10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 CD302Q8IX05 232 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 OGFOD1Q8N543 542 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 METTL13Q8N6R0 699 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 SLC17A8Q8NDX2 589 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 SHISA4Q96DD7 197 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 TDRD3Q9H7E2 651 aaKnown RBP10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 KBTBD4Q9NVX7 518 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 CEP72Q9P209 647 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 SH3BP1Q9Y3L3 701 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 BCL9O00512 1426 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 ADAMTS3O15072 1205 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 CHMP2AO43633 222 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 LUC7L3O95232 432 aaKnown RBP10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 FGFR4P22455 802 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 GNA11P29992 359 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 PMS2P54278 862 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 EIF3BP55884 814 aaKnown RBP10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 SLC8A3P57103 927 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 XRCC4Q13426 336 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 SEC23AQ15436 765 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 SEPT7Q16181 437 aaKnown RBP10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 AGBL2Q5U5Z8 902 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 RCSD1Q6JBY9 416 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 ZNF449Q6P9G9 518 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 NEK8Q86SG6 692 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 DDX12PQ92771 950 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 CD209Q9NNX6 404 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 DCP1AQ9NPI6 582 aaPredicted RBP10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 ZNF277Q9NRM2 450 aaPredicted RBP10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 CNTNAP5Q8WYK1 1306 aa10.37□□□□□ -0.75
TMPRSS4-220ENST00000618855 CFAP73A6NFT4 308 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 CCDC188H7C350 402 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 SLC29A2Q14542 456 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 FIGNQ5HY92 759 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 MEI1Q5TIA1 1274 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 ARMC3Q5W041 872 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 C6orf89Q6UWU4 347 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 LONP2Q86WA8 852 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 TBCKQ8TEA7 893 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 ARHGEF2Q92974 986 aaKnown RBP10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 CCSER1Q9C0I3 900 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 NEUROG2Q9H2A3 272 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 NKIRAS1Q9NYS0 192 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 TMOD2Q9NZR1 351 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 PCDHB13Q9Y5F0 798 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 RGPD1P0DJD0 1748 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 AKAP12Q02952 1782 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 PPEF1O14829 653 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms