RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SPDL1Q96EA4 605 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 FMO2Q99518 471 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ECT2Q9H8V3 914 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ZC3H4Q9UPT8 1303 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 CENPUQ71F23 418 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 RFX6Q8HWS3 928 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 MB21D2Q8IYB1 491 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 MMGT1Q8N4V1 131 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 METTL13Q8N6R0 699 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 TBCKQ8TEA7 893 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 RAD54LQ92698 747 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ZMAT2Q96NC0 199 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 HGSO14964 777 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 LIG4P49917 911 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 BYSLQ13895 437 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 TRIM10Q9UDY6 481 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 KLHL2O95198 593 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ATP1A1P05023 1023 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 SRGAP2BP0DMP2 458 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 IL6STP40189 918 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 FAM83BQ5T0W9 1011 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ARHGAP18Q8N392 663 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 POMGNT1Q8WZA1 660 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 MS4A14Q96JA4 679 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 CNOT6LQ96LI5 555 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 C7orf25Q9BPX7 421 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 CEP72Q9P209 647 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 TUBE1Q9UJT0 475 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 PPP1R3GB7ZBB8 358 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 TTC4O95801 387 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 PLCG1P19174 1290 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 PSMD6Q15008 389 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 HEXIM2Q96MH2 286 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 IQANK1A0A1B0GTG1 560 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ARHGAP10A1A4S6 786 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 PSMD14O00487 310 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 EIF3HO15372 352 aaKnown RBP eCLIP3.28□□□□□ -1.88
LPP-221ENST00000618621 ATP6V0A1Q93050 837 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 SUGCTQ9HAC7 445 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 KIAA1586Q9HCI6 787 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ABHD10Q9NUJ1 306 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 LIMA1Q9UHB6 759 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 ITIH2P19823 946 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ARL1P40616 181 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 TFDP1Q14186 410 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 NAB2Q15742 525 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 JADE1Q6IE81 842 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 BAG5Q9UL15 447 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 K7ENM7 598 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 DYNC1I2Q13409 638 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 CUL4BQ13620 913 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 PDCD7Q8N8D1 485 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 ARMC2Q8NEN0 867 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ZC4H2Q9NQZ6 224 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ASNSD1Q9NWL6 643 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 CLIC2O15247 247 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 HNRNPCL1O60812 293 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 SRGNP10124 158 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 DPYDQ12882 1025 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 TBX2Q13207 712 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 COL23A1Q86Y22 540 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 UHMK1Q8TAS1 419 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 SYN2Q92777 582 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 TTC1Q99614 292 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 CYP26B1Q9NR63 512 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 NOC2LQ9Y3T9 749 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 NR2F2P24468 414 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ARL4CP56559 192 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 LRRC41Q15345 812 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 GEN1Q17RS7 908 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 KNOP1Q1ED39 458 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 USH1GQ495M9 461 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 FSCBQ5H9T9 825 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 RHOT2Q8IXI1 618 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 CDKL2Q92772 493 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 FAF1Q9UNN5 650 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 TRPM2O94759 1503 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 UTYO14607 1347 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 MLH3Q9UHC1 1453 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 POC1B-GALNT4F8VUJ3 575 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 HEXIM1O94992 359 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 KRT3P12035 628 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 LRRC23Q53EV4 343 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 PDXDC1Q6P996 788 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 UNC13DQ70J99 1090 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 PDIK1LQ8N165 341 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 TTLL11Q8NHH1 800 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 DCAF4Q8WV16 495 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 SPOCK2Q92563 424 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 SPATS2LQ9NUQ6 558 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 DNAJC12Q9UKB3 198 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ARL2BPQ9Y2Y0 163 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 LRRC10BA6NIK2 292 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 RASSF10A6NK89 507 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 FTCDO95954 541 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 FTLP02792 175 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 YY1P25490 414 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 PLCB4Q15147 1175 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 ILDR1Q86SU0 546 aaPredicted RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 FLAD1Q8NFF5 587 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms