RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 GCNT4Q9P109 453 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 C10orf71Q711Q0 1435 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 ASTN1O14525 1302 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 RSPH10B2B2RC85 870 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 C6orf229H3BNL8 230 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 CCDC188H7C350 402 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 PDXKO00764 312 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 NR3C1P04150 777 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 RSPH10BP0C881 870 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 SPATA31C1P0DKV0 1188 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 YTHDF3Q7Z739 585 aaKnown RBP22.25■■□□□ 1.15
NEK3-208ENST00000618534 DAAM2Q86T65 1068 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 RASGEF1CQ8N431 466 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 SYT2Q8N9I0 419 aaPredicted RBP22.25■■□□□ 1.15
NEK3-208ENST00000618534 UBLCP1Q8WVY7 318 aaPredicted RBP22.25■■□□□ 1.15
NEK3-208ENST00000618534 P2RX7Q99572 595 aaKnown RBP22.25■■□□□ 1.15
NEK3-208ENST00000618534 SLC12A6Q9UHW9 1150 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 H0YHG0 523 aa22.24■■□□□ 1.15
NEK3-208ENST00000618534 CRY2Q49AN0 593 aa22.24■■□□□ 1.15
NEK3-208ENST00000618534 RNF187Q5TA31 235 aaPredicted RBP22.24■■□□□ 1.15
NEK3-208ENST00000618534 U2AF1L4Q8WU68 220 aaKnown RBP22.24■■□□□ 1.15
NEK3-208ENST00000618534 SLC35C1Q96A29 364 aa22.24■■□□□ 1.15
NEK3-208ENST00000618534 BCCIPQ9P287 314 aaKnown RBP eCLIP22.24■■□□□ 1.15
NEK3-208ENST00000618534 SUCLA2Q9P2R7 463 aaPredicted RBP22.24■■□□□ 1.15
NEK3-208ENST00000618534 DNM3Q9UQ16 869 aa22.24■■□□□ 1.15
NEK3-208ENST00000618534 SRRM3A6NNA2 597 aaPredicted RBP22.23■■□□□ 1.15
NEK3-208ENST00000618534 TTI1O43156 1089 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 ARHGAP4P98171 946 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 NT5DC3Q86UY8 548 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 VPS36Q86VN1 386 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 CELF4Q9BZC1 486 aaKnown RBP22.23■■□□□ 1.15
NEK3-208ENST00000618534 CLIC2O15247 247 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 IFT88Q13099 833 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 FAM182BQ5T319 152 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 LMBR1Q8WVP7 490 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 CYFIP2Q96F07 1278 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 GLT8D2Q9H1C3 349 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 TYW1Q9NV66 732 aaKnown RBP22.23■■□□□ 1.15
NEK3-208ENST00000618534 MYO3BQ8WXR4 1341 aa22.23■■□□□ 1.15
NEK3-208ENST00000618534 A0A0A6YYK5 440 aaPredicted RBP22.22■■□□□ 1.15
NEK3-208ENST00000618534 MEIS2O14770 477 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 ANXA13P27216 316 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 RPA1P27694 616 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 KCNA1Q09470 495 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 CERKQ8TCT0 537 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 SLITRK6Q9H5Y7 841 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 USP40Q9NVE5 1235 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 TAF1LQ8IZX4 1826 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 GREB1LQ9C091 1923 aaPredicted RBP22.22■■□□□ 1.15
NEK3-208ENST00000618534 ATP8B3O60423 1300 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 GFPT2O94808 682 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 TMOD1P28289 359 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 BIRC3Q13489 604 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 RUFY4Q6ZNE9 571 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 TMC3Q7Z5M5 1100 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 ERMNQ8TAM6 284 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 CRYGNQ8WXF5 182 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 RBM17Q96I25 401 aaKnown RBP22.22■■□□□ 1.15
NEK3-208ENST00000618534 CEP89Q96ST8 783 aa22.22■■□□□ 1.15
NEK3-208ENST00000618534 METTL14Q9HCE5 456 aaKnown RBP22.22■■□□□ 1.15
NEK3-208ENST00000618534 GCNT3O95395 438 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 CYP4A11Q02928 519 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 SYCE1Q8N0S2 351 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 LNX1Q8TBB1 728 aaPredicted RBP22.21■■□□□ 1.15
NEK3-208ENST00000618534 HES6Q96HZ4 224 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 RUSC1Q9BVN2 902 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 DPH5Q9H2P9 285 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 PCDHB13Q9Y5F0 798 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 RIMBP2O15034 1052 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 SLC16A3O15427 465 aaKnown RBP22.21■■□□□ 1.15
NEK3-208ENST00000618534 MNAT1P51948 309 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 GALCP54803 685 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 MTMR3Q13615 1198 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 BMT2Q1RMZ1 405 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 SWT1Q5T5J6 900 aaKnown RBP22.21■■□□□ 1.15
NEK3-208ENST00000618534 MOXD1Q6UVY6 613 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 FAM196AQ6ZSG2 479 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 CERS5Q8N5B7 392 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 OLIG1Q8TAK6 271 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 LENG9Q96B70 501 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 MXD3Q9BW11 206 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 IKZF4Q9H2S9 585 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 OSGEPQ9NPF4 335 aa22.21■■□□□ 1.15
NEK3-208ENST00000618534 CNOT8Q9UFF9 292 aaKnown RBP22.21■■□□□ 1.15
NEK3-208ENST00000618534 RPL13P26373 211 aaKnown RBP22.2■■□□□ 1.14
NEK3-208ENST00000618534 SHROOM1Q2M3G4 852 aaPredicted RBP22.2■■□□□ 1.14
NEK3-208ENST00000618534 C6orf89Q6UWU4 347 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 CCDC26Q8TAB7 109 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 BHMT2Q9H2M3 363 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 GGA2Q9UJY4 613 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 INTUQ9ULD6 942 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 GMNCA6NCL1 334 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 DCDC2CA8MYV0 355 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 USP8P40818 1118 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 SCNN1DP51172 638 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 SNAP25P60880 206 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 AP3B2Q13367 1082 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 ODF2Q5BJF6 829 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 AGBL2Q5U5Z8 902 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 CABS1Q96KC9 395 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms