RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CELF4Q9BZC1 486 aaKnown RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 ZBP1Q9H171 429 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 MFSD1Q9H3U5 465 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 DCTPP1Q9H773 170 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 RNF19AQ9NV58 838 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 TUBE1Q9UJT0 475 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 ANHXE9PGG2 379 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 M0QZ92 97 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 ZBTB5O15062 677 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 GHRP10912 638 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 EIF2AK2P19525 551 aaKnown RBP5.3□□□□□ -1.56
SNCA-213ENST00000618500 ERVFC1P60507 584 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 PPFIA1Q13136 1202 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 EP400NLQ6ZTU2 488 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 NLRX1Q86UT6 975 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 NETO1Q8TDF5 533 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 ESR2Q92731 530 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 CASD1Q96PB1 797 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 RIOX1Q9H6W3 641 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 SETD4Q9NVD3 440 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 PCDHB7Q9Y5E2 793 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 GREB1Q4ZG55 1949 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 IGKV6D-21A0A0A0MT36 114 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 GCOM1H8Y6P7 765 aaPredicted RBP5.3□□□□□ -1.56
SNCA-213ENST00000618500 NOP56O00567 594 aaKnown RBP5.3□□□□□ -1.56
SNCA-213ENST00000618500 SLC30A4O14863 429 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 ATG7O95352 703 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 POLR2MP0CAP2 368 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 KCNA2P16389 499 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 MFAP1P55081 439 aaKnown RBP5.3□□□□□ -1.56
SNCA-213ENST00000618500 PRKCQQ04759 706 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 CTDSPL2Q05D32 466 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 ZBTB33Q86T24 672 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 DDX53Q86TM3 631 aaKnown RBP5.3□□□□□ -1.56
SNCA-213ENST00000618500 ZBTB44Q8NCP5 570 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 CYP2W1Q8TAV3 490 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 GLG1Q92896 1179 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 ZNF558Q96NG5 402 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 SPG21Q9NZD8 308 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 DPP7Q9UHL4 492 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 LRFN2Q9ULH4 789 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 KIAA1549LQ6ZVL6 1849 aa5.3□□□□□ -1.56
SNCA-213ENST00000618500 GPR182O15218 404 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 EFEMP2O95967 443 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 APPP05067 770 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 CTSHP09668 335 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 RPS9P46781 194 aaKnown RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 ATXN1P54253 815 aaKnown RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 MRPS9P82933 396 aaKnown RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 KRT17Q04695 432 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 ELMSAN1Q6PJG2 1045 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 PPP1R13LQ8WUF5 828 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 SEPT1Q8WYJ6 367 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 AGO3Q9H9G7 860 aaKnown RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 PADI3Q9ULW8 664 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 PALM3A6NDB9 673 aaPredicted RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 INPPL1O15357 1258 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 RANBP6O60518 1105 aaKnown RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 KINO60870 393 aaKnown RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 PARP1P09874 1014 aaKnown RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 CTSAP10619 480 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 TDGF1P13385 188 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 PMLP29590 882 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 CD52P31358 61 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 GRM4Q14833 912 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 ACAP1Q15027 740 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 USH1GQ495M9 461 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 ATAT1Q5SQI0 421 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 RTL10Q7L3V2 364 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 NIPA1Q7RTP0 329 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 MAML2Q8IZL2 1156 aaPredicted RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 PNMA1Q8ND90 353 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 IL31RAQ8NI17 732 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 EVI5LQ96CN4 794 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 TCF25Q9BQ70 676 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 SSX2IPQ9Y2D8 614 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 UBIAD1Q9Y5Z9 338 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 PDCD11Q14690 1871 aaKnown RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 GSTTP1A0A1W2PQM5 241 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 PPP1R11O60927 126 aaPredicted RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 PAPSS2O95340 614 aaPredicted RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 PDE4AP27815 886 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 CRYBB1P53674 252 aaPredicted RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 ZNF484Q5JVG2 852 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 C1orf210Q8IVY1 113 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 LINC01465Q8N7H1 131 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 PJA1Q8NG27 643 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 TBC1D5Q92609 795 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 CLDN23Q96B33 292 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 SHDQ96IW2 340 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 MTA3Q9BTC8 594 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 HERC2P3Q9BVR0 1158 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 CNNM2Q9H8M5 875 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 ATP6V0A4Q9HBG4 840 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 ZSCAN32Q9NX65 697 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 ISY1Q9ULR0 285 aaKnown RBP5.29□□□□□ -1.56
SNCA-213ENST00000618500 HCFC2Q9Y5Z7 792 aa5.29□□□□□ -1.56
SNCA-213ENST00000618500 BRWD1Q9NSI6 2320 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 LILRB3O75022 631 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 SKIP12755 728 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms