RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 DBR1Q9UK59 544 aaKnown RBP25.33■■□□□ 1.65
CBWD3-213ENST00000618217 HPSEQ9Y251 543 aa25.33■■□□□ 1.65
CBWD3-213ENST00000618217 COL1A2P08123 1366 aa25.33■■□□□ 1.64
CBWD3-213ENST00000618217 TXLNAP40222 546 aa25.32■■□□□ 1.64
CBWD3-213ENST00000618217 ATN1P54259 1190 aaPredicted RBP25.32■■□□□ 1.64
CBWD3-213ENST00000618217 NPEPPSP55786 919 aa25.32■■□□□ 1.64
CBWD3-213ENST00000618217 GDF6Q6KF10 455 aaPredicted RBP25.32■■□□□ 1.64
CBWD3-213ENST00000618217 OTUD6AQ7L8S5 288 aa25.32■■□□□ 1.64
CBWD3-213ENST00000618217 TRAPPC12Q8WVT3 735 aa25.32■■□□□ 1.64
CBWD3-213ENST00000618217 GBP4Q96PP9 640 aa25.32■■□□□ 1.64
CBWD3-213ENST00000618217 SH2D3AQ9BRG2 576 aa25.32■■□□□ 1.64
CBWD3-213ENST00000618217 PANK2Q9BZ23 570 aa25.32■■□□□ 1.64
CBWD3-213ENST00000618217 CCDC39Q9UFE4 941 aa25.32■■□□□ 1.64
CBWD3-213ENST00000618217 A0A1B0GVL5 298 aa25.31■■□□□ 1.64
CBWD3-213ENST00000618217 MBLAC1A4D2B0 266 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-213ENST00000618217 RRN3P2A6NIE6 340 aa25.31■■□□□ 1.64
CBWD3-213ENST00000618217 E9PMD0 336 aa25.31■■□□□ 1.64
CBWD3-213ENST00000618217 GADD45BO75293 160 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-213ENST00000618217 RARRES1P49788 294 aa25.31■■□□□ 1.64
CBWD3-213ENST00000618217 NAALADL2Q58DX5 795 aa25.31■■□□□ 1.64
CBWD3-213ENST00000618217 CDK5RAP3Q96JB5 506 aa25.31■■□□□ 1.64
CBWD3-213ENST00000618217 CYP26B1Q9NR63 512 aa25.31■■□□□ 1.64
CBWD3-213ENST00000618217 FAM13BQ9NYF5 915 aa25.31■■□□□ 1.64
CBWD3-213ENST00000618217 DNM3Q9UQ16 869 aa25.31■■□□□ 1.64
CBWD3-213ENST00000618217 EYA4O95677 639 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 PFKFB1P16118 471 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 ZNF200P98182 395 aaPredicted RBP25.3■■□□□ 1.64
CBWD3-213ENST00000618217 E2F4Q16254 413 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 FAM47CQ5HY64 1035 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 GOLPH3LQ9H4A5 285 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 KCNH3Q9ULD8 1083 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 EVPLQ92817 2033 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 C17orf102A2RUQ5 167 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 LRRC26Q2I0M4 334 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 MTERF2Q49AM1 385 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 RRAGBQ5VZM2 374 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 ANKRD33Q7Z3H0 272 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 PDILTQ8N807 584 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 MRPS27Q92552 414 aaKnown RBP25.3■■□□□ 1.64
CBWD3-213ENST00000618217 CEP170P1Q96L14 293 aa25.3■■□□□ 1.64
CBWD3-213ENST00000618217 ALPK3Q96L96 1907 aa25.29■■□□□ 1.64
CBWD3-213ENST00000618217 PRPF40AO75400 957 aaKnown RBP25.29■■□□□ 1.64
CBWD3-213ENST00000618217 IGBP1P78318 339 aa25.29■■□□□ 1.64
CBWD3-213ENST00000618217 XKR9Q5GH70 373 aa25.29■■□□□ 1.64
CBWD3-213ENST00000618217 CCDC73Q6ZRK6 1079 aa25.29■■□□□ 1.64
CBWD3-213ENST00000618217 FAM126BQ8IXS8 530 aa25.29■■□□□ 1.64
CBWD3-213ENST00000618217 FSIP1Q8NA03 581 aa25.29■■□□□ 1.64
CBWD3-213ENST00000618217 RASSF8Q8NHQ8 419 aa25.29■■□□□ 1.64
CBWD3-213ENST00000618217 ZBTB10Q96DT7 871 aa25.29■■□□□ 1.64
CBWD3-213ENST00000618217 BHMT2Q9H2M3 363 aa25.29■■□□□ 1.64
CBWD3-213ENST00000618217 TRMT13Q9NUP7 481 aaKnown RBP25.29■■□□□ 1.64
CBWD3-213ENST00000618217 PPME1Q9Y570 386 aa25.29■■□□□ 1.64
CBWD3-213ENST00000618217 TREHO43280 583 aa25.28■■□□□ 1.64
CBWD3-213ENST00000618217 C22orf31O95567 290 aa25.28■■□□□ 1.64
CBWD3-213ENST00000618217 GNAT1P11488 350 aa25.28■■□□□ 1.64
CBWD3-213ENST00000618217 KLRC1P26715 233 aa25.28■■□□□ 1.64
CBWD3-213ENST00000618217 NDUFA8P51970 172 aa25.28■■□□□ 1.64
CBWD3-213ENST00000618217 TRPV6Q9H1D0 765 aa25.28■■□□□ 1.64
CBWD3-213ENST00000618217 PDLIM7Q9NR12 457 aa25.28■■□□□ 1.64
CBWD3-213ENST00000618217 STK17AQ9UEE5 414 aa25.28■■□□□ 1.64
CBWD3-213ENST00000618217 GOLGA6L4A6NEF3 574 aa25.27■■□□□ 1.64
CBWD3-213ENST00000618217 POLR2DO15514 142 aaKnown RBP25.27■■□□□ 1.64
CBWD3-213ENST00000618217 B4GALT4O60513 344 aa25.27■■□□□ 1.64
CBWD3-213ENST00000618217 CD4P01730 458 aa25.27■■□□□ 1.64
CBWD3-213ENST00000618217 TRIM60Q495X7 471 aa25.27■■□□□ 1.64
CBWD3-213ENST00000618217 TPRNQ4KMQ1 711 aa25.27■■□□□ 1.64
CBWD3-213ENST00000618217 MTHFD1LQ6UB35 978 aa25.27■■□□□ 1.64
CBWD3-213ENST00000618217 RAD54LQ92698 747 aa25.27■■□□□ 1.64
CBWD3-213ENST00000618217 TOX2Q96NM4 488 aa25.27■■□□□ 1.64
CBWD3-213ENST00000618217 DHX33Q9H6R0 707 aaKnown RBP25.27■■□□□ 1.64
CBWD3-213ENST00000618217 TUBE1Q9UJT0 475 aa25.27■■□□□ 1.64
CBWD3-213ENST00000618217 IGKV6-21A0A0C4DH24 114 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 SLC12A3P55017 1021 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 TLE2Q04725 743 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 PTGISQ16647 500 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 SYT2Q8N9I0 419 aaPredicted RBP25.26■■□□□ 1.63
CBWD3-213ENST00000618217 LMBRD1Q9NUN5 540 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 MROH7Q68CQ1 1323 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 MAFO75444 373 aaPredicted RBP25.26■■□□□ 1.63
CBWD3-213ENST00000618217 PLA2G4BP0C869 781 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 STAT6P42226 847 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 RTP1P59025 263 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 UBE2HP62256 183 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 SERINC5Q86VE9 423 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 LINC01465Q8N7H1 131 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 IQUBQ8NA54 791 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 ENGASEQ8NFI3 743 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 PCDHA2Q9Y5H9 948 aa25.26■■□□□ 1.63
CBWD3-213ENST00000618217 ARHGEF35A5YM69 484 aa25.25■■□□□ 1.63
CBWD3-213ENST00000618217 MAGEB2O15479 319 aa25.25■■□□□ 1.63
CBWD3-213ENST00000618217 RFC5P40937 340 aa25.25■■□□□ 1.63
CBWD3-213ENST00000618217 TBC1D8BQ0IIM8 1120 aa25.25■■□□□ 1.63
CBWD3-213ENST00000618217 MCM6Q14566 821 aa25.25■■□□□ 1.63
CBWD3-213ENST00000618217 PADI6Q6TGC4 694 aa25.25■■□□□ 1.63
CBWD3-213ENST00000618217 LARP4BQ92615 738 aaKnown RBP25.25■■□□□ 1.63
CBWD3-213ENST00000618217 DHX58Q96C10 678 aa25.25■■□□□ 1.63
CBWD3-213ENST00000618217 PQBP1O60828 265 aaKnown RBP25.24■■□□□ 1.63
CBWD3-213ENST00000618217 MKRN4PQ13434 485 aaPredicted RBP25.24■■□□□ 1.63
CBWD3-213ENST00000618217 SNW1Q13573 536 aaKnown RBP25.24■■□□□ 1.63
CBWD3-213ENST00000618217 RUFY4Q6ZNE9 571 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms