RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 E2F7Q96AV8 911 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 GAD1Q99259 594 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 CRTAC1Q9NQ79 661 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 DUSP3P51452 185 aaPredicted RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 JAKMIP2Q96AA8 810 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 ADH1AP07327 375 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 CLDND1Q9NY35 253 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 N4BP3O15049 544 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 GGPS1O95749 300 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 MCM3P25205 808 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 LBX1P52954 281 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 MAPRE1Q15691 268 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 ACCSLQ4AC99 568 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 MFSD4BQ5TF39 518 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 MICALCLQ6ZW33 695 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 TRIM58Q8NG06 486 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 STRADBQ9C0K7 418 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 LCMT1Q9UIC8 334 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 LRRIQ3A6PVS8 624 aaPredicted RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 SFNP31947 248 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 MTHFRP42898 656 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 ATP1A2P50993 1020 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 EPHB3P54753 998 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 CHRNDQ07001 517 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 METTL22Q9BUU2 404 aaPredicted RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 DDX56Q9NY93 547 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 DDX25Q9UHL0 483 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 ATP6V0A2Q9Y487 856 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 CPDO75976 1380 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 KDELC2Q7Z4H8 507 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 MICU3Q86XE3 530 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 FAM89AQ96GI7 184 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 PLCD1P51178 756 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 ITKQ08881 620 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 SEL1L2Q5TEA6 688 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 TGFBRAP1Q8WUH2 860 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 ZNF496Q96IT1 587 aaPredicted RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 SENP1Q9P0U3 644 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 BCL9LQ86UU0 1499 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 TJP1Q07157 1748 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 GOLGA8JA6NMD2 632 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 ADCY6O43306 1168 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 PCCAP05165 728 aaPredicted RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 OXCT1P55809 520 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 RBPJQ06330 500 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 STK3Q13188 491 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 FGL2Q14314 439 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 UBXN2BQ14CS0 331 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 LARSQ9P2J5 1176 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 CASP8AP2Q9UKL3 1982 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 PSMA7O14818 248 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 RHOBTB3O94955 611 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 AP3B2Q13367 1082 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 RCSD1Q6JBY9 416 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 CLYBLQ8N0X4 340 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 SCFD2Q8WU76 684 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 TEX13BQ9BXU2 312 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 NOP58Q9Y2X3 529 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 CES1P23141 567 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 AFMP43652 599 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 GSE1Q14687 1217 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 SLC26A6Q9BXS9 759 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 FBXO10Q9UK96 956 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PCDHGB3Q9Y5G1 929 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 KRT5P13647 590 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PCDH10Q9P2E7 1040 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 ABCC12Q96J65 1359 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 MAP3K19Q56UN5 1328 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 ITGA4P13612 1032 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 BRD2P25440 801 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 CHRNA5P30532 468 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 RINT1Q6NUQ1 792 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 FRA10AC1Q70Z53 315 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 BZW1Q7L1Q6 419 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 PLEKHM2Q8IWE5 1019 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 APPL2Q8NEU8 664 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 HELLSQ9NRZ9 838 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PDHXO00330 501 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 ERCC5P28715 1186 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 EVCP57679 992 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 MRFAP1L1Q96HT8 127 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 ACAP3Q96P50 834 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 IDI2Q9BXS1 227 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 ERICH4A6NGS2 130 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 MX1P20591 662 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 THOP1P52888 689 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 ATAT1Q5SQI0 421 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 SLFN13Q68D06 897 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 VPS52Q8N1B4 723 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 MTRQ99707 1265 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 RNF146Q9NTX7 359 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PI4KAP2A4QPH2 592 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 SCP2P22307 547 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PTPN5P54829 565 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 COG7P83436 770 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 NFIAQ12857 509 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 RASA3Q14644 834 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PI4KAP1Q8N8J0 262 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 CD99L2Q8TCZ2 262 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 CHMP6Q96FZ7 201 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms