RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 TBC1D22BQ9NU19 505 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 WDR90Q96KV7 1748 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 ATP2A1O14983 1001 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 ZNF862O60290 1169 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 RARRES1P49788 294 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 ERVK-24P63145 666 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 PTPN14Q15678 1187 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 LY6KQ17RY6 165 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 KNOP1Q1ED39 458 aaKnown RBP8.6□□□□□ -1.03
NEK3-207ENST00000617054 XKR9Q5GH70 373 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 GPAT2Q6NUI2 795 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 ANO5Q75V66 913 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 ACRBPQ8NEB7 543 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 INPP4AQ96PE3 977 aaPredicted RBP8.6□□□□□ -1.03
NEK3-207ENST00000617054 PARVGQ9HBI0 331 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 ABHD10Q9NUJ1 306 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 COL4A3BPQ9Y5P4 624 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 FRMPD4Q14CM0 1322 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 IQCA1LA6NCM1 817 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 HOXA7P31268 230 aaPredicted RBP8.6□□□□□ -1.03
NEK3-207ENST00000617054 LRRC63Q05C16 580 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 VWA3BQ502W6 1294 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 CCDC60Q8IWA6 550 aaPredicted RBP8.6□□□□□ -1.03
NEK3-207ENST00000617054 FAM178BQ8IXR5 827 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 ZSWIM2Q8NEG5 633 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 FIZ1Q96SL8 496 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 NMRK2Q9NPI5 230 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 LZTFL1Q9NQ48 299 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 MAP3K20Q9NYL2 800 aaKnown RBP8.6□□□□□ -1.03
NEK3-207ENST00000617054 AGTPBP1Q9UPW5 1226 aa8.6□□□□□ -1.03
NEK3-207ENST00000617054 TGFB1I1O43294 461 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 AKAP3O75969 853 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 MAPK7Q13164 816 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 COBLL1Q53SF7 1204 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 FAM102BQ5T8I3 360 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 SYT10Q6XYQ8 523 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 ANKRD13CQ8N6S4 541 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 CCDC43Q96MW1 224 aaKnown RBP8.59□□□□□ -1.03
NEK3-207ENST00000617054 PCIF1Q9H4Z3 704 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 PPP2R2CQ9Y2T4 447 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 RBBP6Q7Z6E9 1792 aaKnown RBP8.59□□□□□ -1.03
NEK3-207ENST00000617054 WDR64B1ANS9 1081 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 CXCL11O14625 94 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 FANCGO15287 622 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 GRIN3BO60391 1043 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 CELF2O95319 508 aaKnown RBP8.59□□□□□ -1.03
NEK3-207ENST00000617054 PLEKP08567 350 aaPredicted RBP8.59□□□□□ -1.03
NEK3-207ENST00000617054 DNM2P50570 870 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 CYP2J2P51589 502 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 ALDH5A1P51649 535 aaPredicted RBP8.59□□□□□ -1.03
NEK3-207ENST00000617054 ACTR2P61160 394 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 PPIL2Q13356 520 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 STXBP2Q15833 593 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 ENOX2Q16206 610 aaKnown RBP8.59□□□□□ -1.03
NEK3-207ENST00000617054 DCAF17Q5H9S7 520 aaPredicted RBP8.59□□□□□ -1.03
NEK3-207ENST00000617054 TCERG1LQ5VWI1 586 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 EPM2AIP1Q7L775 607 aaPredicted RBP8.59□□□□□ -1.03
NEK3-207ENST00000617054 ZNF720Q7Z2F6 126 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 RIOX2Q8IUF8 465 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 REXO1L1PQ8IX06 675 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 FBXO22Q8NEZ5 403 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 JPH1Q9HDC5 661 aaPredicted RBP8.59□□□□□ -1.03
NEK3-207ENST00000617054 NLRC4Q9NPP4 1024 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.59□□□□□ -1.03
NEK3-207ENST00000617054 PCDHA10Q9Y5I2 948 aa8.59□□□□□ -1.03
NEK3-207ENST00000617054 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.59□□□□□ -1.03
NEK3-207ENST00000617054 SLC16A4O15374 487 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 STX10O60499 249 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 PEX3P56589 373 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 GJC2Q5T442 439 aaPredicted RBP8.58□□□□□ -1.04
NEK3-207ENST00000617054 NIPA1Q7RTP0 329 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 PNMA8AQ86V59 439 aaPredicted RBP8.58□□□□□ -1.04
NEK3-207ENST00000617054 FAM114A1Q8IWE2 563 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 SLC9A2Q9UBY0 812 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 KCNH4Q9UQ05 1017 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 LUC7L2Q9Y383 392 aaKnown RBP8.58□□□□□ -1.04
NEK3-207ENST00000617054 ARHGAP6O43182 974 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 NRDCO43847 1150 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 ACTN1P12814 892 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 PSMC5P62195 406 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 KCNMA1Q12791 1236 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 NAA30Q147X3 362 aaPredicted RBP8.58□□□□□ -1.04
NEK3-207ENST00000617054 LDLRAD1Q5T700 205 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 WDR59Q6PJI9 974 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 NYAP1Q6ZVC0 841 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 CHST13Q8NET6 341 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 COPS5Q92905 334 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 CEP170P1Q96L14 293 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 ZMYM2Q9UBW7 1377 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 MKI67P46013 3256 aaKnown RBP8.58□□□□□ -1.04
NEK3-207ENST00000617054 UQCRHLA0A096LP55 91 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 SPATA31C2B4DYI2 1134 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 K7ENM7 598 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 ARIH2O95376 493 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 UQCRHP07919 91 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 TPM2P07951 284 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 MARK3P27448 753 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 PPP1R2P41236 205 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms